A9IMI9 (GLGA_BORPD) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	Bpet2372

Organism

Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]

Taxonomic identifier

340100 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	521 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	binding Inferred from electronic annotation. Source: InterPro starch synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 521	521	Glycogen synthase HAMAP MF_00484		PRO_1000126056
Sites
	Binding site	18	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	A9IMI9 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: ACD484DCFA5F218B	FASTA	521	55,754
	10 20 30 40 50 60 MARTSSLMVT SEAFPLAKSG GLGDAVTGLA RALSRAGVDT GILMPAYRGV LDRVVGIRHI 70 80 90 100 110 120 AHLAGMPGGE ATLVGALCPE SGLPFYLLCN PGLYDRDGLY LDEQGQPYAD NAVRFAALAH 130 140 150 160 170 180 AAMRVAAGLP GMRRPDILHA QDWHAGLVPL LVRAAGLRYV KTVLTVHNLA FQGSFELECA 190 200 210 220 230 240 GQIGVPGAYC TDDGARLHGR INFMKAGLRY ADRITTVSRN YAREIMTPEF GCGLDPLLRA 250 260 270 280 290 300 RAADLAPIPN GIDDALWNPA SDPHLGHLCY SARNPARKSR AKAALQKAFG LHPDQGAALL 310 320 330 340 350 360 AMGSRLTSQK MADVAVEALP DALHRHPSLQ VAIIGRGERQ YEIELEALAA RYPGRCAVRI 370 380 390 400 410 420 GYDETTAHRL HAGADMLLHG SRFEPFGLTP LYAMRYGAVP IASRVGGMAD TIVDPGEREG 430 440 450 460 470 480 SQAMLAATGI LFDGDGAPDM GHAIDRALRL YAQPAIWRSM QRNGMACEFG WNTAAQPYLD 490 500 510 520 LFENMVDAPR RGRVPAPTIR PAPLPAYARS SLDGMPAPAA Y

References

[1]

"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae." Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R. BMC Genomics 9:449-449(2008) [PubMed: 18826580] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-461 / DSM 12804 / CCUG 43448.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM902716 Genomic DNA. Translation: CAP42715.1.
RefSeq	YP_001630983.1. NC_010170.1.
3D structure databases
ProteinModelPortal	A9IMI9.
ModBase	Search...
Protein-protein interaction databases
STRING	A9IMI9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5818213.
GenomeReviews	Gene locus Bpet2372 in contig AM902716_GR.
KEGG	bpt:Bpet2372.
PATRIC	21166212. VBIBorPet31633_2368.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	ASRFEPC.
ProtClustDB	PRK00654.
Enzyme and pathway databases
BioCyc	BPET94624:BPET2372-MONOMER.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. IPR011990. TPR-like_helical. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_BORPD

Accession

Primary (citable) accession number: A9IMI9

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	February 5, 2008
Last modified:	January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program