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Protein

Ribonuclease PH

Gene

rph

Organism
Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates.UniRule annotationSAAS annotation

Catalytic activityi

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseUniRule annotationSAAS annotationImported, Transferase
Biological processtRNA processingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease PHUniRule annotationSAAS annotation (EC:2.7.7.56UniRule annotationSAAS annotation)
Short name:
RNase PHUniRule annotation
Alternative name(s):
tRNA nucleotidyltransferaseUniRule annotation
Gene namesi
Name:rphUniRule annotationImported
Ordered Locus Names:Bpet2268Imported
OrganismiBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)Imported
Taxonomic identifieri340100 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
Proteomesi
  • UP000001225 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi340100.Bpet2268.

Structurei

3D structure databases

ProteinModelPortaliA9ILQ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 149RNase_PHInterPro annotationAdd BLAST131
Domaini167 – 232RNase_PH_CInterPro annotationAdd BLAST66

Sequence similaritiesi

Belongs to the RNase PH family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105ED0. Bacteria.
COG0689. LUCA.
HOGENOMiHOG000229516.
KOiK00989.
OMAiKGKGQGW.
OrthoDBiPOG091H03ML.

Family and domain databases

CDDicd11362. RNase_PH_bact. 1 hit.
Gene3Di3.30.230.70. 1 hit.
HAMAPiMF_00564. RNase_PH. 1 hit.
InterProiView protein in InterPro
IPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
PfamiView protein in Pfam
PF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsiTIGR01966. RNasePH. 1 hit.
PROSITEiView protein in PROSITE
PS01277. RIBONUCLEASE_PH. 1 hit.

Sequencei

Sequence statusi: Complete.

A9ILQ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSTASAVA RPSGRAVDQL RPFSLQRGYT RYAEGSVLVR AGNTHVLCTA
60 70 80 90 100
SVLDKVPPFL KGRGEGWVTA EYGMLPRATH TRGDREAARG KQSGRTQEIQ
110 120 130 140 150
RLIGRSLRAV FDMKALGERT LHLDCDVLQA DGGTRCASIT GAWVAAADAV
160 170 180 190 200
ALLMQRGDLA ANPIRDAVAA VSVGMVAGRP VLDLDYQEDS ACDADVNVVM
210 220 230 240
TGAGAFVEVQ GTGEGATFAR SELDAMLGLA EQGIAQLVRA QREALA
Length:246
Mass (Da):25,915
Last modified:February 5, 2008 - v1
Checksum:i53ACB1E08D17C0A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM902716 Genomic DNA. Translation: CAP42611.1.

Genome annotation databases

EnsemblBacteriaiCAP42611; CAP42611; Bpet2268.
KEGGibpt:Bpet2268.

Similar proteinsi

Entry informationi

Entry nameiA9ILQ1_BORPD
AccessioniPrimary (citable) accession number: A9ILQ1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: September 27, 2017
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported