A9IL25 (IHFB_BART1) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Integration host factor subunit beta
Short name=IHF-beta

Gene names

Name:	ihfB
Synonyms:	himD
Ordered Locus Names:	BT_0014

Organism

Bartonella tribocorum (strain CIP 105476 / IBS 506) [Complete proteome] [HAMAP]

Taxonomic identifier

382640 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bartonellaceae › Bartonella

Protein attributes

Sequence length	92 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control By similarity. HAMAP MF_00381
Subunit structure	Heterodimer of an alpha and a beta chain By similarity. HAMAP MF_00381
Sequence similarities	Belongs to the bacterial histone-like protein family.

Ontologies

Keywords
Biological process	DNA recombination Transcription Transcription regulation Translation regulation
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA recombination Inferred from electronic annotation. Source: UniProtKB-KW regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW regulation of translation Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 92	92	Integration host factor subunit beta HAMAP MF_00381		PRO_1000190435

Sequences

	Sequence		Length	Mass (Da)
	A9IL25 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: EB20EEE698EAAB6D	FASTA	92	10,450
	10 20 30 40 50 60 MVKSELVQII ARHNPHLFQR DVENIVNAIF EEISTALANG DRVELRGFGA FSVKSRSARN 70 80 90 GRNPRTGEAV AVDEKWIPFF KTGKDLRDRL NQ

References

[1]

"Genomic analysis of Bartonella identifies type IV secretion systems as host adaptability factors." Saenz H.L., Engel P., Stoeckli M.C., Lanz C., Raddatz G., Vayssier-Taussat M., Birtles R., Schuster S.C., Dehio C. Nat. Genet. 39:1469-1476(2007) [PubMed: 18037886] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CIP 105476 / IBS 506.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM260525 Genomic DNA. Translation: CAK00518.1.
RefSeq	YP_001608513.1. NC_010161.1.
3D structure databases
ProteinModelPortal	A9IL25.
ModBase	Search...
Protein-protein interaction databases
STRING	A9IL25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5829094.
GenomeReviews	Gene locus BT_0014 in contig AM260525_GR.
PATRIC	20547742. VBIBarTri113218_0036.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG705085.
OMA	VKRRDAR.
ProtClustDB	PRK00199.
Enzyme and pathway databases
BioCyc	BTRI382640:BT_0014-MONOMER.
Family and domain databases
HAMAP	MF_00381. IHF-beta. [Tree]
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. IPR005685. IHF_beta. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
TIGRFAMs	TIGR00988. Hip. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

IHFB_BART1

Accession

Primary (citable) accession number: A9IL25

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	February 5, 2008
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program