A9IK87 (RS21_BORPD) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S21

Gene names

Name:	rpsU
Ordered Locus Names:	Bpet2033

Organism

Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]

Taxonomic identifier

340100 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	70 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S21P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 70	70	30S ribosomal protein S21 HAMAP MF_00358		PRO_1000120593

Sequences

	Sequence		Length	Mass (Da)
	A9IK87 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 41BB50D1D918D1F0	FASTA	70	8,535
	10 20 30 40 50 60 MPIVRLKENE PFEAALRRFK RTIEKTGLLT ELRSREFYEK PTAERKRKHA AAVKRHYKRI 70 RSQQLPPRLY

References

[1]

"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae." Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R. BMC Genomics 9:449-449(2008) [PubMed: 18826580] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-461 / DSM 12804 / CCUG 43448.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM902716 Genomic DNA. Translation: CAP42373.1.
RefSeq	YP_001630642.1. NC_010170.1.
3D structure databases
ProteinModelPortal	A9IK87.
SMR	A9IK87. Positions 4-54.
ModBase	Search...
Protein-protein interaction databases
STRING	A9IK87.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5818053.
GenomeReviews	Gene locus Bpet2033 in contig AM902716_GR.
KEGG	bpt:Bpet2033.
PATRIC	21165529. VBIBorPet31633_2029.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG708268.
OMA	FFEKPTW.
ProtClustDB	PRK00270.
Enzyme and pathway databases
BioCyc	BPET94624:BPET2033-MONOMER.
Family and domain databases
HAMAP	MF_00358. Ribosomal_S21. [Tree]
InterPro	IPR001911. Ribosomal_S21. IPR018278. Ribosomal_S21_CS. [Graphical view]
KO	K02970.
Pfam	PF01165. Ribosomal_S21. 1 hit. [Graphical view]
PRINTS	PR00976. RIBOSOMALS21.
ProDom	PD005521. Ribosomal_S21. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00030. S21p. 1 hit.
PROSITE	PS01181. RIBOSOMAL_S21. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS21_BORPD

Accession

Primary (citable) accession number: A9IK87

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	February 5, 2008
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program