A9IJ06 (A9IJ06_BORPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor G 2 HAMAP MF_00054
Short name=EF-G 2 HAMAP MF_00054

Gene names

Name:	fusA2 HAMAP MF_00054 EMBL CAP45307.1
Ordered Locus Names:	Bpet4955

Organism

Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]

Taxonomic identifier

340100 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	700 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome By similarity. HAMAP MF_00054
Subcellular location	Cytoplasm By similarity HAMAP MF_00054.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily. HAMAP MF_00054

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP MF_00054
Ligand	GTP-binding RuleBase RU000323 HAMAP MF_00054 Nucleotide-binding
Molecular function	Elongation factor HAMAP MF_00054 EMBL CAP45307.1 Hydrolase EMBL CAP45307.1
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	GTP binding Inferred from electronic annotation. Source: HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	17 – 24	8	GTP By similarity HAMAP MF_00054
	Nucleotide binding	88 – 92	5	GTP By similarity HAMAP MF_00054
	Nucleotide binding	142 – 145	4	GTP By similarity HAMAP MF_00054

Sequences

	Sequence		Length	Mass (Da)
	A9IJ06 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: C30E5A64B2B80761	FASTA	700	77,134
	10 20 30 40 50 60 MARKTPIERY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG 70 80 90 100 110 120 ITITSAATTA FWRGMAGNYP EHRINIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ 130 140 150 160 170 180 PQSETVWRQA NKYGVPRLAF VNKMDRTGAN FFKVYDQLKT RLRANPVPIV IPIGAEDSFK 190 200 210 220 230 240 GVIDLVKMKA IIWDEASQGT KFDYVDIPAE LEGAANEWRE KLVEAAAEST EELMNKYLET 250 260 270 280 290 300 GSLDEAEINT AIRQRTIAGE IQPMLCGTAF KNKGVQRMLD AVIDYLPSPI DIPPVAGQDD 310 320 330 340 350 360 EGNEISRKAD DGEKMSALAF KLMSDPFVGQ LTFVRVYSGI LKSGDTVYNP IKGKKERVGR 370 380 390 400 410 420 LLQMHANNRE EIKEVLAGDI AAVVGLKDVT TGETLCDVDS HILLERMEFP EPVISQAVEP 430 440 450 460 470 480 KSKADQEKMG LALSRLAQED PSFRVRSDEE SGQTIISGMG ELHLEILVDR MKREFGVEAN 490 500 510 520 530 540 VGKPQVAYRE TIRKTCEEVE GKFVKQSGGR GQYGHVVLKL EPLEPGGGYE FVDAIKGGVV 550 560 570 580 590 600 PREYIPAVDK GIQETLPAGI LAGYPVVDVK ATLFFGSYHD VDSNENAFKM AASMAFKEGM 610 620 630 640 650 660 RKASPVLLEP MMAVEVETPE DYAGTVMGDL SSRRGMVQGM EDMVGGGKTI KAEVPLAEMF 670 680 690 700 GYATNLRSLT QGRATYTMEF KHYSEAPKNV ADEVIAARAK

References

[1]

"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae." Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R. BMC Genomics 9:449-449(2008) [PubMed: 18826580] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM902716 Genomic DNA. Translation: CAP45307.1.
RefSeq	YP_001633574.1. NC_010170.1.
3D structure databases
ProteinModelPortal	A9IJ06.
SMR	A9IJ06. Positions 1-695.
ModBase	Search...
Protein-protein interaction databases
STRING	A9IJ06.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5819141.
GenomeReviews	Gene locus Bpet4955 in contig AM902716_GR.
KEGG	bpt:Bpet4955.
PATRIC	21171518. VBIBorPet31633_4985.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG737692.
OMA	CNEWREK.
ProtClustDB	PRK00007.
Family and domain databases
HAMAP	MF_00054_B. EF_G_EF_2_B. [Tree]
InterPro	IPR009022. Elongation_fac_G/III/V. IPR000795. ProtSyn_GTP-bd. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. IPR005225. Small_GTP-bd_dom. IPR004540. Transl_elong_EFG/EF2. IPR000640. Transl_elong_EFG/EF2_C. IPR005517. Transl_elong_EFG/EF2_IV. IPR004161. Transl_elong_EFTu/EF1A_2. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
Gene3D	G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit. G3DSA:3.30.70.240. Transl_elong_EFG/EF2_C. 1 hit.
KO	K02355.
Pfam	PF00679. EFG_C. 1 hit. PF03764. EFG_IV. 1 hit. PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SMART	SM00838. EFG_C. 1 hit. SM00889. EFG_IV. 1 hit. [Graphical view]
SUPFAM	SSF54980. EFG_III_V. 2 hits. SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00484. EF-G. 1 hit. TIGR00231. Small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9IJ06_BORPD

Accession

Primary (citable) accession number: A9IJ06

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)