A9IIR3 (A9IIR3_BORPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-methylcitrate dehydratase EMBL CAP42151.1
EC=4.2.1.79 EMBL CAP42151.1

Gene names

Name:	prpD EMBL CAP42151.1
Ordered Locus Names:	Bpet1812

Organism

Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]

Taxonomic identifier

340100 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	483 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAP42151.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	propionate catabolic process, 2-methylcitrate cycle Inferred from electronic annotation. Source: InterPro
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro 2-methylcitrate dehydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9IIR3 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 209BF87B68AD5208	FASTA	483	53,559
	10 20 30 40 50 60 MSTPVSNIRP EPDQVLVDIV DYVLGYEIDS KLAYETARNC LIDTLGCGLE ALEYPACRKL 70 80 90 100 110 120 LGPIVPGTVV PNGAKVPGTQ FQLDPVQAAF NIGAMIRWLD FNDTWLAAEW GHPSDNLGGI 130 140 150 160 170 180 LATADWLSRN AIAAGKAPLT MRDVLAGMIK AHEIQGCIAL ENSFNKVGLD HVVLVKVATT 190 200 210 220 230 240 AVVAQLLGLD REETINAVSL AWVDGQSLRT YRHAPNTGSR KSWAAGDATS RAVRLALMAR 250 260 270 280 290 300 TGEMGYPSVL TTKTWGFYDV LFKGQPFKFQ RPYGSYVMEN VLFKISFPAE FHAQTAVECA 310 320 330 340 350 360 MDIHKRLQAA GKSAGDISRI TIRTHEACIR IIDKKGPRNN PADRDHCIQY MVAVPVLFGR 370 380 390 400 410 420 LTAADYEDDV ARDPRIDALR DKIVCVEDPA FTRDYHDPDK RSIANALTVE FNDGTRLDEI 430 440 450 460 470 480 VCEYPIGHKR RRQEGIPLLE AKFRTNLARI FPPRQQARIL AASLDQQTLE AMPVHEYVDL YVI

References

[1]

"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae." Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R. BMC Genomics 9:449-449(2008) [PubMed: 18826580] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM902716 Genomic DNA. Translation: CAP42151.1.
RefSeq	YP_001630420.1. NC_010170.1.
3D structure databases
ProteinModelPortal	A9IIR3.
SMR	A9IIR3. Positions 11-483.
ModBase	Search...
Protein-protein interaction databases
STRING	A9IIR3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5821120.
GenomeReviews	Gene locus Bpet1812 in contig AM902716_GR.
KEGG	bpt:Bpet1812.
PATRIC	21165077. VBIBorPet31633_1803.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG298383.
OMA	CLMDTLG.
ProtClustDB	PRK09425.
Family and domain databases
InterPro	IPR012705. 2Me_IsoCit_deHydtase_PrpD. IPR005656. MmgE_PrpD. [Graphical view]
KO	K01720.
PANTHER	PTHR16943. MmgE_PrpD. 1 hit.
Pfam	PF03972. MmgE_PrpD. 1 hit. [Graphical view]
SUPFAM	SSF103378. MmgE_PrpD. 1 hit.
TIGRFAMs	TIGR02330. PrpD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9IIR3_BORPD

Accession

Primary (citable) accession number: A9IIR3

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)