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A9HYN2 (A9HYN2_BORPD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.4.4 EMBL CAP43853.1
Gene names
Name:bkdA2 EMBL CAP43853.1
Ordered Locus Names:Bpet3510
OrganismBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]
Taxonomic identifier340100 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length347 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A9HYN2 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 2B2905A94DEFB3B0

FASTA34737,696
        10         20         30         40         50         60 
MADEKNMGPA TTSMTMIQAL RSAMDVMLER DSNVVVFGQD VGYFGGVFRC TEGLQAKYGT 

        70         80         90        100        110        120 
SRVFDSPISE GGIVGVAVGM GAYGLRPVCE IQFADYFYPA SDQIVSEAAR LRYRSAGEFI 

       130        140        150        160        170        180 
APMTIRMPCG GGIYGGQTHS QSPEAMFTQV CGLRTVLPSN PYDAKGLLIA AIESDDPVIF 

       190        200        210        220        230        240 
LEPKRLYNGP FDGHHDRPVT PWSKHPGSQV PTGYYTVPLE SAAIVRPGDA LTVLTYGTTV 

       250        260        270        280        290        300 
HVSLAAAQET GLDAEVIDLR SLWPLDLETI VNSVRKTGRC VVVHEATRTC GFGAELVSLV 

       310        320        330        340 
QEHCFHHLEA PIERVTGWDT PYPHAQEWAY FPGPARVGAA FQRVMEA 

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References

[1]"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae."
Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. expand/collapse author list , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R.
BMC Genomics 9:449-449(2008) [PubMed: 18826580] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM902716 Genomic DNA. Translation: CAP43853.1.
RefSeqYP_001632121.1. NC_010170.1.

3D structure databases

ProteinModelPortalA9HYN2.
SMRA9HYN2. Positions 10-346.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9HYN2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5817903.
GenomeReviewsGene locus Bpet3510 in contig AM902716_GR.
KEGGbpt:Bpet3510.
PATRIC21168625. VBIBorPet31633_3548.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG753264.
OMAHAFEWDY.
ProtClustDBCLSK864051.

Family and domain databases

InterProIPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR015941. Transketolase-like_C.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
Gene3DG3DSA:3.40.50.920. Transketo_C_like. 1 hit.
KOK00167.
PfamPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52922. Transketo_C_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9HYN2_BORPD
AccessionPrimary (citable) accession number: A9HYN2
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)