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A9HWM4 (A9HWM4_BORPD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.22 EMBL CAP40514.1
Gene names
Name:ugd EMBL CAP40514.1
Ordered Locus Names:Bpet0183
OrganismBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]
Taxonomic identifier340100 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A9HWM4 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: C2F877EA3408E583

FASTA44047,518
        10         20         30         40         50         60 
MKITVIGTGY VGLVSGACLA DMGNEVLCLD VDAAKIQTLQ QGGIPIYEPG LDDLVKRNAQ 

        70         80         90        100        110        120 
AGRLKFTDDV AASVAFGDVQ FIAVGTPPGE DGSADLQHVL AAARNIARHM TTRKVVVDKS 

       130        140        150        160        170        180 
TVPVGTADKV RQAMAGVLAE RGVDVPFSVA SNPEFLKEGA AIKDFMSPDR IIVGADDDYT 

       190        200        210        220        230        240 
VDVMRRLYAP FQRTHERLMV MDVRSAELTK YAANAMLATR ISFMNEMANL AEALGADVEQ 

       250        260        270        280        290        300 
VRRGIGADPR IGYHFLYPGV GYGGSCFPKD VQALVQTAAE HGLPMRVVAA AEAANDAQKL 

       310        320        330        340        350        360 
RLSQKIVARF GEDLSGRTFA LWGLAFKPNT DDMREAPSLT AIAELTRRGA LVRAYDPIAM 

       370        380        390        400        410        420 
PHSRQILAHN PAVAFADDMY QALDGADALL IATEWKVFRA PDLDRMRALL KTPLVIDGRN 

       430        440 
LYVPAEIRAQ GFEYLGIGRA 

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References

[1]"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae."
Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. expand/collapse author list , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R.
BMC Genomics 9:449-449(2008) [PubMed: 18826580] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM902716 Genomic DNA. Translation: CAP40514.1.
RefSeqYP_001628785.1. NC_010170.1.

3D structure databases

ProteinModelPortalA9HWM4.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9HWM4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5820606.
GenomeReviewsGene locus Bpet0183 in contig AM902716_GR.
KEGGbpt:Bpet0183.
PATRIC21161819. VBIBorPet31633_0190.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG400967.
OMALIHTARE.
ProtClustDBCLSK921173.

Family and domain databases

InterProIPR008927. 6-PGluconate_DH_C-like.
IPR021157. Cyt_c1_TM_anchor_C.
IPR016040. NAD(P)-bd_dom.
IPR017476. Nucleotide_sugar_DH.
IPR014027. UDP-Glc/GDP-Man_DH_C.
IPR014026. UDP-Glc/GDP-Man_DH_dimer.
IPR001732. UDP-Glc/GDP-Man_DH_N.
[Graphical view]
Gene3DG3DSA:1.20.5.100. Cyt_c1_TM_anchor_C. 1 hit.
G3DSA:3.40.50.720. NAD(P)-bd. 2 hits.
KOK00012.
PfamPF00984. UDPG_MGDP_dh. 1 hit.
PF03720. UDPG_MGDP_dh_C. 1 hit.
PF03721. UDPG_MGDP_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000124. UDPglc_GDPman_dh. 1 hit.
SMARTSM00984. UDPG_MGDP_dh_C. 1 hit.
[Graphical view]
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMsTIGR03026. NDP-sugDHase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9HWM4_BORPD
AccessionPrimary (citable) accession number: A9HWM4
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)