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A9HVX4 (SYR_BORPD) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase

EC=6.1.1.19
Alternative name(s):
Arginyl-tRNA synthetase
Short name=ArgRS
Gene names
Name:argS
Ordered Locus Names:Bpet0069
OrganismBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]
Taxonomic identifier340100 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP-Rule MF_00123

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00123

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processarginyl-tRNA aminoacylation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

arginine-tRNA ligase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 561561Arginine--tRNA ligase HAMAP-Rule MF_00123
PRO_1000095337

Regions

Motif129 – 13911"HIGH" region HAMAP-Rule MF_00123

Sequences

Sequence LengthMass (Da)Tools
A9HVX4 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 725FB2DDFB306D6F

FASTA56161,445
        10         20         30         40         50         60 
MLPEQQQQLI SLIQAAVASV LPDAQAQVLL ERPKVAAHGD VATNIAMQLA KPARRNPREL 

        70         80         90        100        110        120 
AQGIVDALMA ETAARALVEN AEIAGPGFIN FRITAAARQA VIQAVAEQGE AYGHAPATGE 

       130        140        150        160        170        180 
KVLVEFVSAN PTGPLHVGHA RQAALGDAIC RLYAATGRDV TREFYYNDAG NQIQNLAVSV 

       190        200        210        220        230        240 
QARARGIAPD SPDYPADGYK GDYIVDIAQD FIARKTLQAA DGAAVTASGD VDNLDDIRVF 

       250        260        270        280        290        300 
AVAYLRREQD LDLQAFGLAF DNYYLESSLY TSGRVEQTVQ ALVAKGHTYE QDGALWLRTT 

       310        320        330        340        350        360 
ELGTGDDKDR VMRKSEGGYT YFVPDVAYHK AKWERGFRHA VNIQGSDHHG TVARVRAGLQ 

       370        380        390        400        410        420 
ALEEGIPKDY PAYVLHKMVK VMRGGEEVKI SKRAGSYVTL RDLIDWVGRD AVRYFLIQRR 

       430        440        450        460        470        480 
ADTEFVFDID LALSKSDENP VYYIQYAHAR ICSMIANAGA DDARIAQADT ALLTAPTEFA 

       490        500        510        520        530        540 
LMQRLASFPQ IVAQAAQELA PHHIAFWLRD CASDFHAWYN AERVLVDDEP LKLARLRLAA 

       550        560 
TTRQVLANGL ALLGVSAPQR M 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM902716 Genomic DNA. Translation: CAP40400.1.
RefSeqYP_001628671.1. NC_010170.1.

3D structure databases

ProteinModelPortalA9HVX4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING340100.Bpet0069.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAP40400; CAP40400; Bpet0069.
GeneID5819111.
KEGGbpt:Bpet0069.
PATRIC21161579. VBIBorPet31633_0071.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0018.
HOGENOMHOG000247214.
KOK01887.
OMANPNGPLH.
OrthoDBEOG6JB13C.
ProtClustDBPRK01611.

Enzyme and pathway databases

BioCycBPET340100:GJBO-69-MONOMER.

Family and domain databases

Gene3D1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPMF_00123. Arg_tRNA_synth.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERPTHR11956. PTHR11956. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsTIGR00456. argS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYR_BORPD
AccessionPrimary (citable) accession number: A9HVX4
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: February 5, 2008
Last modified: April 16, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries