A9HMX8 (A9HMX8_GLUDA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit 2 HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202

Gene names

Name:	dadA EMBL CAP56365.1
Synonyms:	dadA2 HAMAP MF_01202
Ordered Locus Names:	GDI2422

Organism

Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) [Complete proteome] [HAMAP]

Taxonomic identifier

272568 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Acetobacteraceae › Gluconacetobacter

Protein attributes

Sequence length	417 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202 SAAS SAAS023080
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202 SAAS SAAS023080
Cofactor	FAD By similarity. HAMAP MF_01202 SAAS SAAS023080
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202 SAAS SAAS023080
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP MF_01202 SAAS SAAS023080 Flavoprotein HAMAP MF_01202 SAAS SAAS023080
Molecular function	Oxidoreductase HAMAP MF_01202 SAAS SAAS023080
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	3 – 17	15	FAD By similarity HAMAP MF_01202

Sequences

	Sequence		Length	Mass (Da)
	A9HMX8 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 1865425EB00A222B	FASTA	417	45,149
	10 20 30 40 50 60 MKIIILGSGV VGVSSAWYLA QVGHSVTVID RQPGAGLETS FANAGQVSPG YSSPWAGPGV 70 80 90 100 110 120 PLKAVRWLMM KNRPFVFWPM PDIGQWRWLA QMLQNCTTAA YDRNKGRMVR LAEYSRDVLA 130 140 150 160 170 180 DLRAATGITY DDRQQGTLQV FRTQKQLDHI GDDLRVLDQY QVPYEVLDTA GCIHAEPGLS 190 200 210 220 230 240 GAREKIVGGL RLPGDETGDA FQFTQRLAAM AAERGVTFLY DTTIRALRRE GGRITGVDTS 250 260 270 280 290 300 RGMLEADAYV LSLGSFSPAM VRALGLDLPI YPVKGYSITA PILDAARAPV STVMDETFKI 310 320 330 340 350 360 GITRLGDRIR VGGTAELAGF STSLRAPRRA TLEHSLTDLF AGAGDVPAAT FWTGLRPMTP 370 380 390 400 410 DGTPIVGRTE IGNLYLNTGH GTLGWTMACG SGRVLADIMS GRTPDIAHED LALARYR

References

[1]	"Gluconacetobacter diazotrophicus Pal5 complete genome." Bertalan M., Baldani I.J., Ferreira P. Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49037 / DSM 5601 / PAl5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM889285 Genomic DNA. Translation: CAP56365.1.
RefSeq	YP_001602666.1. NC_010125.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A9HMX8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5789072.
GenomeReviews	Gene locus GDI2422 in contig AM889285_GR.
KEGG	gdi:GDI_2422.
PATRIC	22060380. VBIGluDia122154_2344.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG729204.
OMA	VDRQPAV.
ProtClustDB	CLSK2403145.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9HMX8_GLUDA

Accession

Primary (citable) accession number: A9HMX8

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)