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A9HIF1

- A9HIF1_GLUDA

UniProt

A9HIF1 - A9HIF1_GLUDA

Protein

UvrABC system protein C

Gene

uvrC

Organism
Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-HAMAP
    2. excinuclease ABC activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. nucleotide-excision repair Source: UniProtKB-HAMAP
    2. SOS response Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Excision nucleaseUniRule annotationSAAS annotation

    Keywords - Biological processi

    DNA damage, DNA excisionUniRule annotationSAAS annotation, DNA repair, SOS responseUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciGDIA272568:GJPS-1852-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    UvrABC system protein CUniRule annotation
    Short name:
    Protein UvrCUniRule annotation
    Alternative name(s):
    Excinuclease ABC subunit CUniRule annotation
    Gene namesi
    Name:uvrCUniRule annotationImported
    Ordered Locus Names:GDI1818Imported
    OrganismiGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)Imported
    Taxonomic identifieri272568 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeGluconacetobacter
    ProteomesiUP000001176: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. excinuclease repair complex Source: InterPro

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Interacts with UvrB in an incision complex.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliA9HIF1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini34 – 11279GIY-YIGUniRule annotationAdd
    BLAST
    Domaini222 – 25736UVRUniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the UvrC family.UniRule annotation
    Contains 1 GIY-YIG domain.UniRule annotation
    Contains 1 UVR domain.UniRule annotation
    Contains GIY-YIG domain.SAAS annotation
    Contains UVR domain.SAAS annotation

    Phylogenomic databases

    KOiK03703.
    OMAiQTIASCV.
    OrthoDBiEOG6K13R9.

    Family and domain databases

    Gene3Di3.40.1440.10. 1 hit.
    4.10.860.10. 1 hit.
    HAMAPiMF_00203. UvrC.
    InterProiIPR027299. GIY-YIG_dom.
    IPR000305. GIY-YIG_SF.
    IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
    IPR010994. RuvA_2-like.
    IPR001943. UVR_dom.
    IPR004791. UvrC.
    IPR001162. UvrC_homol_region.
    [Graphical view]
    PfamiPF01541. GIY-YIG. 1 hit.
    PF02151. UVR. 1 hit.
    PF08459. UvrC_HhH_N. 1 hit.
    [Graphical view]
    SMARTiSM00465. GIYc. 1 hit.
    SM00278. HhH1. 2 hits.
    [Graphical view]
    SUPFAMiSSF46600. SSF46600. 1 hit.
    SSF47781. SSF47781. 1 hit.
    SSF82771. SSF82771. 1 hit.
    TIGRFAMsiTIGR00194. uvrC. 1 hit.
    PROSITEiPS50164. GIY_YIG. 1 hit.
    PS50151. UVR. 1 hit.
    PS50165. UVRC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A9HIF1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDERTCRLMD ADVVPASSVK GVEAILLALQ TMPLSPGVYR MLGEKGEVLY    50
    VGKARILKRR VTSYTHLSKL PERLRRMVSE TVTMEIVTTH TEAEALLLEA 100
    NYIKRMKPRF NILLRDDKSY PWIMLTDGAE FPQVTKHRGK PVKGASYWGP 150
    FASAWAVNQT LNLIQRVFLL RTCSDSVFAS RTRPCLLFQI KRCSAPCVAR 200
    IGQAEYAHLV EQARAFLSGQ RGGIREELVR EMEAAAASLE FERAATIRDR 250
    IRGFAAMQDS SVINPASLDD ADIVAIAQAA GHSCIQVFFI RGGRNNGNRA 300
    FFPAHARDEA APDIVGAFLA QFYDDKPPPA QILLNCEIAE HDLMADALGI 350
    KRGRKVEILV PKRGEKRAVV EHAETNAREA LERKLAESTA QARLLEGMAD 400
    LFGLDAPPRR IEIYDNSHIM GTNAYGVMVV AGPEGFDKRS YRKFSIRGPI 450
    TPGDDFAMMR EVLERRFSRA LRERDDSAGA SSPADWPDIV LIDGGAGQYS 500
    AVRAVLDELG VTDVTLVAIA KGPDRDAGRE WFHMADRPPF QLPPRDPVLY 550
    YLQRLRDEAH RFAITTHRAG RSKALVKSEL DEIPGVGAAR KRALLNQFGS 600
    ARGVRQAGLA ELEATQGINR ETARVVYGHF HPGWTGA 637
    Length:637
    Mass (Da):70,639
    Last modified:February 5, 2008 - v1
    Checksum:iDC0C612F08D9C545
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM889285 Genomic DNA. Translation: CAP55761.1.
    RefSeqiWP_012225369.1. NC_010125.1.
    YP_001602063.1. NC_010125.1.

    Genome annotation databases

    EnsemblBacteriaiCAP55761; CAP55761; GDI1818.
    GeneIDi5789412.
    KEGGigdi:GDI_1818.
    PATRICi22059182. VBIGluDia122154_1753.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM889285 Genomic DNA. Translation: CAP55761.1 .
    RefSeqi WP_012225369.1. NC_010125.1.
    YP_001602063.1. NC_010125.1.

    3D structure databases

    ProteinModelPortali A9HIF1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAP55761 ; CAP55761 ; GDI1818 .
    GeneIDi 5789412.
    KEGGi gdi:GDI_1818.
    PATRICi 22059182. VBIGluDia122154_1753.

    Phylogenomic databases

    KOi K03703.
    OMAi QTIASCV.
    OrthoDBi EOG6K13R9.

    Enzyme and pathway databases

    BioCyci GDIA272568:GJPS-1852-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1440.10. 1 hit.
    4.10.860.10. 1 hit.
    HAMAPi MF_00203. UvrC.
    InterProi IPR027299. GIY-YIG_dom.
    IPR000305. GIY-YIG_SF.
    IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
    IPR010994. RuvA_2-like.
    IPR001943. UVR_dom.
    IPR004791. UvrC.
    IPR001162. UvrC_homol_region.
    [Graphical view ]
    Pfami PF01541. GIY-YIG. 1 hit.
    PF02151. UVR. 1 hit.
    PF08459. UvrC_HhH_N. 1 hit.
    [Graphical view ]
    SMARTi SM00465. GIYc. 1 hit.
    SM00278. HhH1. 2 hits.
    [Graphical view ]
    SUPFAMi SSF46600. SSF46600. 1 hit.
    SSF47781. SSF47781. 1 hit.
    SSF82771. SSF82771. 1 hit.
    TIGRFAMsi TIGR00194. uvrC. 1 hit.
    PROSITEi PS50164. GIY_YIG. 1 hit.
    PS50151. UVR. 1 hit.
    PS50165. UVRC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5."
      Bertalan M., Albano R., de Padua V., Rouws L., Rojas C., Hemerly A., Teixeira K., Schwab S., Araujo J., Oliveira A., Franca L., Magalhaes V., Alqueres S., Cardoso A., Almeida W., Loureiro M.M., Nogueira E., Cidade D.
      , Oliveira D., Simao T., Macedo J., Valadao A., Dreschsel M., Freitas F., Vidal M., Guedes H., Rodrigues E., Meneses C., Brioso P., Pozzer L., Figueiredo D., Montano H., Junior J., de Souza Filho G., Martin Quintana Flores V., Ferreira B., Branco A., Gonzalez P., Guillobel H., Lemos M., Seibel L., Macedo J., Alves-Ferreira M., Sachetto-Martins G., Coelho A., Santos E., Amaral G., Neves A., Pacheco A.B., Carvalho D., Lery L., Bisch P., Rossle S.C., Urmenyi T., Rael Pereira A., Silva R., Rondinelli E., von Kruger W., Martins O., Baldani J.I., Ferreira P.C.
      BMC Genomics 10:450-450(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 49037 / DSM 5601 / PAl5Imported.

    Entry informationi

    Entry nameiA9HIF1_GLUDA
    AccessioniPrimary (citable) accession number: A9HIF1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3