SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A9H268

- A9H268_GLUDA

UniProt

A9H268 - A9H268_GLUDA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Putative DNA ligase-like protein

Gene
GDI0169
Organism
Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciGDIA272568:GJPS-175-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase-like proteinImported
Gene namesi
Ordered Locus Names:GDI0169Imported
OrganismiGluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)Imported
Taxonomic identifieri272568 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesAcetobacteraceaeGluconacetobacter
ProteomesiUP000001176: Chromosome

Structurei

3D structure databases

ProteinModelPortaliA9H268.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiSACDMAL.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9H268-1 [UniParc]FASTAAdd to Basket

« Hide

MALDTYRNKR DFEATPEPEG AEAAEKPDTG AGHLFVIQKH AARRLHYDLR    50
LEMDGVLKSW AVTRGPSLNP GDKRLAVQVE DHPLDYGTFE GTIPKGQYGG 100
GTVMLWDKGT WTPLHDPVRG LAKGHLDFEL RGEKLHGRWN LVRMDGHREG 150
THENWLLIKA ADSDARSKND ADILEERPES VKTGRAMDDI AAGAPGKDKV 200
GKAAAQKAVT KKAAIPKDAP QADAAATGAA PCAGAKPGPL PSFVEPELAT 250
LVRAAPTGPQ WLHEVKFDGY RLLARIEAGR VVLLTRTGLD WTARFGDQIS 300
AALASLPVRA ALIDGELVVE TAGGTSDFSA LQADLSAGRT DRFIFYVFDL 350
LHLDGYDLRD ATLEARKGAL HDLVPDDAAR LRFSGHFDEA GGQVLRHACR 400
LGLEGIVSKQ RDAPYRSGRG RDWVKSKCVA RQEFVIGGYV PSTANRGAVG 450
SLVLGVQENG RLVHVGRVGT GFTAATAADL FRRLQPLDVP DSPFAAALTA 500
RERKGVRYVR PDCVAEVEFR AWTADGHLRH AAFLGQREDK PAADIVREVE 550
APDPVSSGPS SKPVKPVSPE PAPARPARTL THPDRSYWPD AGVTKQDLAD 600
YYAAIWPRMA PFITDRALAL LRCPNGIAGP RFFQKNLWKG AGGHLVPLQD 650
PEGEAGTPLI GLHDRDGLID LVQAAALEIH PWGASVQAWS QPDMIVMDLD 700
PGDGVPWSMV IEAAREIRAR LERSGLASFV KTTGGKGLHV VAPLKPGADW 750
AVVKAFTRSM AQAMVSDSPQ RYVATITKSR RQGRILVDYL RNQRGATAVA 800
PYSPRARPGA PVAMPLAWNE LGPDIGPAHF TIGTIGARLA VADPWAEIRD 850
AARPLR 856
Length:856
Mass (Da):92,556
Last modified:February 5, 2008 - v1
Checksum:iC1CDD9863C029CAF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM889285 Genomic DNA. Translation: CAP54112.1.
RefSeqiYP_001600459.1. NC_010125.1.

Genome annotation databases

EnsemblBacteriaiCAP54112; CAP54112; GDI0169.
GeneIDi5792297.
KEGGigdi:GDI_0169.
PATRICi22055994. VBIGluDia122154_0188.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM889285 Genomic DNA. Translation: CAP54112.1 .
RefSeqi YP_001600459.1. NC_010125.1.

3D structure databases

ProteinModelPortali A9H268.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAP54112 ; CAP54112 ; GDI0169 .
GeneIDi 5792297.
KEGGi gdi:GDI_0169.
PATRICi 22055994. VBIGluDia122154_0188.

Phylogenomic databases

KOi K01971.
OMAi SACDMAL.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci GDIA272568:GJPS-175-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5."
    Bertalan M., Albano R., de Padua V., Rouws L., Rojas C., Hemerly A., Teixeira K., Schwab S., Araujo J., Oliveira A., Franca L., Magalhaes V., Alqueres S., Cardoso A., Almeida W., Loureiro M.M., Nogueira E., Cidade D.
    , Oliveira D., Simao T., Macedo J., Valadao A., Dreschsel M., Freitas F., Vidal M., Guedes H., Rodrigues E., Meneses C., Brioso P., Pozzer L., Figueiredo D., Montano H., Junior J., de Souza Filho G., Martin Quintana Flores V., Ferreira B., Branco A., Gonzalez P., Guillobel H., Lemos M., Seibel L., Macedo J., Alves-Ferreira M., Sachetto-Martins G., Coelho A., Santos E., Amaral G., Neves A., Pacheco A.B., Carvalho D., Lery L., Bisch P., Rossle S.C., Urmenyi T., Rael Pereira A., Silva R., Rondinelli E., von Kruger W., Martins O., Baldani J.I., Ferreira P.C.
    BMC Genomics 10:450-450(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 49037 / DSM 5601 / PAl5.

Entry informationi

Entry nameiA9H268_GLUDA
AccessioniPrimary (citable) accession number: A9H268
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi