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Protein
Submitted name:

TreS protein

Gene

treS

Organism
Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciSCEL448385:GJ75-377-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
TreS proteinImported (EC:5.4.99.16Imported)
Gene namesi
Name:treSImported
Ordered Locus Names:sce0361Imported
OrganismiSorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56))Imported
Taxonomic identifieri448385 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesSorangiineaePolyangiaceaeSorangium
ProteomesiUP000002139 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi448385.sce0361.

Structurei

3D structure databases

ProteinModelPortaliA9GQZ3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiGTRIIFT.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

A9GQZ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQDQKPPPA EGSALWYKDA IIYEVHVRAF SDSNADGIGD FEGLVDKLDY
60 70 80 90 100
LQDLGVTAIW LLPFYPSPLR DGGYDIADYA NINPSYGTRR EFARLLREAH
110 120 130 140 150
RRDIRVITEL VLNHTSNEHE WFQRARTSPK GSRWRDFYVW SDTPHRYKDA
160 170 180 190 200
RIIFKDFETS NWAWDPVANA YYWHRFYSHQ PDLNFENPDV HAAVFKVVDF
210 220 230 240 250
WLEMGVDGLR LDAVPYLYER EGTNCENLPE THEFLRKLRR HIDANFADRM
260 270 280 290 300
LLAEANQWPA DAAAYFGSGD ECHMNFHFPL MPRMFMAVEL EDSFPIVNIL
310 320 330 340 350
KQTPVVHETC QWATFLRNHD ELTLEMVTDE DRDYMYRVYA QEHTARINLG
360 370 380 390 400
IRRRLAPLMK TRRRIELMNA LLFSLPGTPV LYYGDEIGMG DNIYLGDRDG
410 420 430 440 450
VRTPMQWSAD RNAGFSRANP QKLYLPIIID PEYHYEAINV EAQQQNPASL
460 470 480 490 500
LWWMKRLITL RKQNKVLGRG TIEFLHPDNS KVLAFIRAHA DERLLIVANL
510 520 530 540 550
SRYAQHVELD LARFEGMVPV ELFGRSRFPE ITSRGYSLSL GPHDFFWFAL
560 570 580 590 600
EPATPAISAG DAEAAPAIAT KGSWRTLLSP EGRRVLEPAL GKFIAARRWF
610 620 630 640 650
RGKARTRRAT TLADVIPILR GEQTAAEHYL LLARVEYTDG SPETYVVPIG
660 670 680 690 700
FATGDYARTL ATRARHAVIA DVTIRDPEPE SAAAPEGVLY DALATPEFAA
710 720 730 740 750
LVLAAIRAQG VATGSVGELH ALPLGTTLET LGADGELPAR ISESEQSNTT
760 770 780 790 800
IIYGDKLLLK IFRQVEEGIN PELEIGRYLT EHQFPATARL AGAIEYQARG
810 820 830 840 850
REATTVAMLQ EYVQSQSDAW KSTLEALNRF FERVLADETA KGGAPPIPAG
860 870 880 890 900
TLVDASRATP PPLVNQLMGT ELVRMRLLGE RTAQLHLTLG KPSKDPAFGQ
910 920 930 940 950
QSFSTLHQQS IFQSAHNMLA RTFALLRKRE RSLPESVREH VSAMLPREAE
960 970 980 990 1000
INAKLQQIVS RKFDIPRIRT HGDFHLGQVL STGDDFILID FEGEPARPLS
1010 1020 1030 1040 1050
ERRYKRGPLR DVGGMLRSFD YAGASALRDA RLRPEDVAVL KPWTDAWVTW
1060 1070 1080 1090 1100
ISASYLAGYM ETVARAQATA EPRTDETAPY LPASDADTVL LIDFYMLEKC
1110 1120 1130
IYEVGYELNN RPDWLDIPLR GLERLITPRA
Length:1,130
Mass (Da):128,130
Last modified:February 5, 2008 - v1
Checksum:iD2AD244B033771AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM746676 Genomic DNA. Translation: CAN90518.1.
RefSeqiWP_012232996.1. NC_010162.1.
YP_001610998.1. NC_010162.1.

Genome annotation databases

EnsemblBacteriaiCAN90518; CAN90518; sce0361.
KEGGiscl:sce0361.
PATRICi23658319. VBISorCel80414_0394.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM746676 Genomic DNA. Translation: CAN90518.1.
RefSeqiWP_012232996.1. NC_010162.1.
YP_001610998.1. NC_010162.1.

3D structure databases

ProteinModelPortaliA9GQZ3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi448385.sce0361.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAN90518; CAN90518; sce0361.
KEGGiscl:sce0361.
PATRICi23658319. VBISorCel80414_0394.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiGTRIIFT.
OrthoDBiEOG6RVFV2.

Enzyme and pathway databases

BioCyciSCEL448385:GJ75-377-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the myxobacterium Sorangium cellulosum."
    Schneiker S., Perlova O., Kaiser O., Gerth K., Alici A., Altmeyer M.O., Bartels D., Bekel T., Beyer S., Bode E., Bode H.B., Bolten C., Choudhuri J.V., Doss S., Elnakady Y.A., Frank B., Gaigalat L., Goesmann A.
    , Groeger C., Gross F., Jelsbak L., Jelsbak L., Kalinowski J., Kegler C., Knauber T., Konietzny S., Kopp M., Krause L., Krug D., Linke B., Mahmud T., Martinez-Arias R., McHardy A.C., Merai M., Meyer F., Mormann S., Munoz-Dorado J., Perez J., Pradella S., Rachid S., Raddatz G., Rosenau F., Ruckert C., Sasse F., Scharfe M., Schuster S.C., Suen G., Treuner-Lange A., Velicer G.J., Vorholter F.J., Weissman K.J., Welch R.D., Wenzel S.C., Whitworth D., Wilhelm S., Wittmann C., Blocker H., Puhler A., Muler R.
    Nat. Biotechnol. 25:1281-1289(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: So ce56Imported.

Entry informationi

Entry nameiA9GQZ3_SORC5
AccessioniPrimary (citable) accession number: A9GQZ3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 27, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.