A9GLJ1 (A9GLJ1_SORC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-xylosidase (14-beta-D-xylan xylohydrolase) (Xylan 14-beta-xylosidase) EMBL CAN90282.1
EC=3.2.1.37 EMBL CAN90282.1

Gene names

Name:	yagH EMBL CAN90282.1
Ordered Locus Names:	sce0125

Organism

Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)) [Complete proteome] [HAMAP]

Taxonomic identifier

448385 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Sorangiineae › Polyangiaceae › Sorangium

Protein attributes

Sequence length	548 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAN90282.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	xylan 1,4-beta-xylosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9GLJ1 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: B5A7CE6B9FB5910A	FASTA	548	61,739
	10 20 30 40 50 60 MPEPVIRNPI LPGFNPDPSI VRVGDDYYVA TSTFEWYPGV QIHHSRDLVH WRLLSRPLNR 70 80 90 100 110 120 ASQLNLLGDG DSCGVWAPCL TYADGLFWLI YTDVKRYGRT TVGGASGASM RDFHNYLVTS 130 140 150 160 170 180 PTVDGEWSDP VHLNSSGFDP SLFHDEDGRK YLSNMLWDHR PGRNRFAGIV LQEYSHAERK 190 200 210 220 230 240 LIGPVTNIFK GTPIGYTEGP HIYKRGGYYY LITAEGGTYQ GHAVTMARSR DLTGPYELHP 250 260 270 280 290 300 ETYILTSRAR ADVALQRAGH ADLCDTPSGD VYMVHLCSRP IPNRGRSTLG RETAIQRMVW 310 320 330 340 350 360 SDDGWLRTAD GEGIPRVEVP APGLPAHPFP ARAAREDFDS PQLPIDFQWL RSPYPDELFS 370 380 390 400 410 420 LTARPGHLRL YGRETLGSLF RQSLVARRQQ AHCYTAVTSV DFTPEHYQQM AGLICYYNTS 430 440 450 460 470 480 KFHYLHISHE ETVGRYLRIM SAIPDGVMAD AFTAPVPIPG TSPVHLRAEL DHDRLYFAYS 490 500 510 520 530 540 LDGTDWSWFP EHLDASILSD EASAPGLPNF TGAFVGMACQ DMSGTGRPAD FDYFEYRERE YLIDPRRP

References

[1]

"Complete genome sequence of the myxobacterium Sorangium cellulosum." Schneiker S., Perlova O., Kaiser O., Gerth K., Alici A., Altmeyer M.O., Bartels D., Bekel T., Beyer S., Bode E., Bode H.B., Bolten C.J., Choudhuri J.V., Doss S., Elnakady Y.A., Frank B., Gaigalat L., Goesmann A. , Groeger C., Gross F., Jelsbak L., Jelsbak L., Kalinowski J., Kegler C., Knauber T., Konietzny S., Kopp M., Krause L., Krug D., Linke B., Mahmud T., Martinez-Arias R., McHardy A.C., Merai M., Meyer F., Mormann S., Munoz-Dorado J., Perez J., Pradella S., Rachid S., Raddatz G., Rosenau F., Rueckert C., Sasse F., Scharfe M., Schuster S.C., Suen G., Treuner-Lange A., Velicer G.J., Vorholter F.-J., Weissman K.J., Welch R.D., Wenzel S.C., Whitworth D.E., Wilhelm S., Wittmann C., Bloecker H., Puehler A., Mueller R. Nat. Biotechnol. 25:1281-1289(2007) [PubMed: 17965706] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM746676 Genomic DNA. Translation: CAN90282.1.
RefSeq	YP_001610762.1. NC_010162.1.
3D structure databases
ProteinModelPortal	A9GLJ1.
ModBase	Search...
Protein-protein interaction databases
STRING	A9GLJ1.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5805781.
GenomeReviews	Gene locus sce0125 in contig AM746676_GR.
KEGG	scl:sce0125.
PATRIC	23657795. VBISorCel80414_0134.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG347235.
OMA	IGSWFEQ.
ProtClustDB	CLSK886374.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01198.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9GLJ1_SORC5

Accession

Primary (citable) accession number: A9GLJ1

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)