A9GIK1 (A9GIK1_SORC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL CAN93277.1

Gene names

Ordered Locus Names:

sce3118

Organism

Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)) [Complete proteome] [HAMAP]

Taxonomic identifier

448385 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Sorangiineae › Polyangiaceae › Sorangium

Protein attributes

Sequence length	581 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9GIK1 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: CF1083063A71CFE9	FASTA	581	59,896
	10 20 30 40 50 60 MRRSRTLART ACCGFALTAV GLVASPSALA DYPIASHRYL ADPASLVHDG RVYLYGSNDD 70 80 90 100 110 120 DNVKADGSDD GYKMASFVAI SSSDMKNWTD HGEVIRVPRD ASWAANTWAP SLVERNGNIY 130 140 150 160 170 180 MYFANNGSGI GVAKSDSPTG PFRDAKGSAL ITSSTPGASG QNIWLFDPGV FIDDDGQAYL 190 200 210 220 230 240 YFGGNGEQNA RVIKLNNDMV SVSGSASTIT IPYFFEASWM HKRNGVYYLS YSTNPANGMR 250 260 270 280 290 300 IDYLTSSSPT SGFTHRGTVG PQPPKNNNNN NHAAIFEFGG SWYHAYHNRS VANDAGEPPG 310 320 330 340 350 360 YRRNLGIESF TYKEDGSIVP VTYTTDGLKQ LANLDPYARV EAETFNAQSG IETEPCEEGG 370 380 390 400 410 420 MDLSFINNGD WVRLRGVDFG EGAESFSARV ASGAEGGSIE LRLDARDGKL VGTCAVGATG 430 440 450 460 470 480 GWQKWSDVSC AVDGAAGVHD LYLVFTGGGS NLFNMNFWQF SPVGGEGAGG GGAGGSTSGG 490 500 510 520 530 540 GDGSVSSVSA SSGGGAGSGS GSGGAPSTGT AAGGGSPSST SAAQASSGGT SDEQSGEPAG 550 560 570 580 CSCRAASRAP SGGALALTAL LAASLGLRQR GRKGRRPGVT S

References

[1]

"Complete genome sequence of the myxobacterium Sorangium cellulosum." Schneiker S., Perlova O., Kaiser O., Gerth K., Alici A., Altmeyer M.O., Bartels D., Bekel T., Beyer S., Bode E., Bode H.B., Bolten C.J., Choudhuri J.V., Doss S., Elnakady Y.A., Frank B., Gaigalat L., Goesmann A. , Groeger C., Gross F., Jelsbak L., Jelsbak L., Kalinowski J., Kegler C., Knauber T., Konietzny S., Kopp M., Krause L., Krug D., Linke B., Mahmud T., Martinez-Arias R., McHardy A.C., Merai M., Meyer F., Mormann S., Munoz-Dorado J., Perez J., Pradella S., Rachid S., Raddatz G., Rosenau F., Rueckert C., Sasse F., Scharfe M., Schuster S.C., Suen G., Treuner-Lange A., Velicer G.J., Vorholter F.-J., Weissman K.J., Welch R.D., Wenzel S.C., Whitworth D.E., Wilhelm S., Wittmann C., Bloecker H., Puehler A., Mueller R. Nat. Biotechnol. 25:1281-1289(2007) [PubMed: 17965706] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM746676 Genomic DNA. Translation: CAN93277.1.
RefSeq	YP_001613757.1. NC_010162.1.
3D structure databases
ProteinModelPortal	A9GIK1.
ModBase	Search...
Protein-protein interaction databases
STRING	A9GIK1.
Protein family/group databases
CAZy	CBM6. Carbohydrate-Binding Module Family 6. GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5808241.
GenomeReviews	Gene locus sce3118 in contig AM746676_GR.
KEGG	scl:sce3118.
PATRIC	23664369. VBISorCel80414_3397.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG585375.
OMA	WTDHGEV.
Family and domain databases
InterPro	IPR006584. Cellulose-bd_IV. IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF03422. CBM_6. 1 hit. PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SMART	SM00606. CBD_IV. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
PROSITE	PS51175. CBM6. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9GIK1_SORC5

Accession

Primary (citable) accession number: A9GIK1

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)