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Protein
Submitted name:

4-aminobutyrate transaminase

Gene

gabT2

Organism
Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSCEL448385:GJ75-8938-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate transaminaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabT2Imported
Ordered Locus Names:sce8625Imported
OrganismiSorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56))Imported
Taxonomic identifieri448385 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesSorangiineaePolyangiaceaeSorangium
ProteomesiUP000002139: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi448385.sce8625.

Structurei

3D structure databases

ProteinModelPortaliA9FZV7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiISACVAP.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9FZV7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPNSDLPLPA APDAGSGAEL PAILSPPPGP LSRSALERLE RVECPAFGRR
60 70 80 90 100
REARAQKSGA DMLPIVLSHG RGANVCDVDG NRYVDLCAGF GALLLGHAAA
110 120 130 140 150
PVRRAAEEQL SRLTLALGDV YSADVKITLL ERLAALHPGP SPMALLGQSG
160 170 180 190 200
SDAITAAVKT AALATGRPGL VAFEGAYHGL GYAPLAACGL RESYRAPFAE
210 220 230 240 250
QLNRRVTFAP YPRDEAGAAR SVDAVELALR RGDVGAVLLE PILGRGGCVV
260 270 280 290 300
PPDAFLPAVC EAAHRHGALV IADEIWTGLG RSGAMTRTGE LGAPVDILCF
310 320 330 340 350
GKGLGGGLPI SACVAPEPIM RAWAREGEVV HTSTHSGSPL ASSAALATLD
360 370 380 390 400
ALDEGRLAAR SRDVGARFQA TLREALPRRA GVVDVRGAGL MVGVELESAE
410 420 430 440 450
MGLRAMRGML AEGYLVLTGG VRGETLTLTP ALTIPEALLS AAAGALARVL

TA
Length:452
Mass (Da):46,478
Last modified:February 5, 2008 - v1
Checksum:i5D3983E2CBF7CA7F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM746676 Genomic DNA. Translation: CAN98795.1.
RefSeqiWP_012241234.1. NC_010162.1.
YP_001619275.1. NC_010162.1.

Genome annotation databases

EnsemblBacteriaiCAN98795; CAN98795; sce8625.
GeneIDi5812803.
KEGGiscl:sce8625.
PATRICi23676441. VBISorCel80414_9409.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM746676 Genomic DNA. Translation: CAN98795.1.
RefSeqiWP_012241234.1. NC_010162.1.
YP_001619275.1. NC_010162.1.

3D structure databases

ProteinModelPortaliA9FZV7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi448385.sce8625.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAN98795; CAN98795; sce8625.
GeneIDi5812803.
KEGGiscl:sce8625.
PATRICi23676441. VBISorCel80414_9409.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiISACVAP.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciSCEL448385:GJ75-8938-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the myxobacterium Sorangium cellulosum."
    Schneiker S., Perlova O., Kaiser O., Gerth K., Alici A., Altmeyer M.O., Bartels D., Bekel T., Beyer S., Bode E., Bode H.B., Bolten C.J., Choudhuri J.V., Doss S., Elnakady Y.A., Frank B., Gaigalat L., Goesmann A.
    , Groeger C., Gross F., Jelsbak L., Jelsbak L., Kalinowski J., Kegler C., Knauber T., Konietzny S., Kopp M., Krause L., Krug D., Linke B., Mahmud T., Martinez-Arias R., McHardy A.C., Merai M., Meyer F., Mormann S., Munoz-Dorado J., Perez J., Pradella S., Rachid S., Raddatz G., Rosenau F., Rueckert C., Sasse F., Scharfe M., Schuster S.C., Suen G., Treuner-Lange A., Velicer G.J., Vorholter F.-J., Weissman K.J., Welch R.D., Wenzel S.C., Whitworth D.E., Wilhelm S., Wittmann C., Bloecker H., Puehler A., Mueller R.
    Nat. Biotechnol. 25:1281-1289(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: So ce56Imported.

Entry informationi

Entry nameiA9FZV7_SORC5
AccessioniPrimary (citable) accession number: A9FZV7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 7, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.