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A9FY79 (A9FY79_SORC5) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length443 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS013452

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS013452

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1071 By similarity HAMAP-Rule MF_00455
Active site1101 By similarity HAMAP-Rule MF_00455
Metal binding2381Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2771Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3021Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3131Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3151Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3451Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
A9FY79 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 1932159A5C82D204

FASTA44349,931
        10         20         30         40         50         60 
MTVVTGDREY FPGVGKIPYE GPESDNPLAF KWYDANRVVA GKAMKDHFKF AVCYWHTFCG 

        70         80         90        100        110        120 
RGHDPFGPGT IYFPWDEGKD ALARARMKMD ANFEFITKLG ATHYCFHDID LVEEGENRAE 

       130        140        150        160        170        180 
TSRRLQSIVE YAKQKQAQSG VKLLWGTANL FSNPRYMNGA STNPDFSVLA YAGAQLKDAL 

       190        200        210        220        230        240 
DATIALNGEN YVFWGGREGY MSLLNTDMKR EKAHFARFLT MARDYARSRG FKGVFFIEPK 

       250        260        270        280        290        300 
PMEPSKHQYD FDAETVIGFL REHGLDKDFK LNLETNHATL AGHTMDHEMQ VAADNGMLGS 

       310        320        330        340        350        360 
IDANRGDYQN AWDTDQFPYN INETVEMMLI LLRSGGFQGG GVNFDAKRRR NSTDLVDTFH 

       370        380        390        400        410        420 
GHIGGMDVFA RSLLIADDLI RKSPLEAMRK ARYASFDGGK GAEFEQGKLT LEQLAEIGNA 

       430        440 
GGEIKLTSGQ QELYENIVNR WIR

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM746676 Genomic DNA. Translation: CAN95592.1.
RefSeqYP_001616072.1. NC_010162.1.

3D structure databases

ProteinModelPortalA9FY79.
SMRA9FY79. Positions 8-442.
ModBaseSearch...

Protein-protein interaction databases

STRING448385.sce5429.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAN95592; CAN95592; sce5429.
GeneID5810100.
KEGGscl:sce5429.
PATRIC23669471. VBISorCel80414_5934.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000252293.
KOK01805.
OMAHTFQHEL.
ProtClustDBPRK05474.

Enzyme and pathway databases

BioCycSCEL448385:GJ75-5615-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9FY79_SORC5
AccessionPrimary (citable) accession number: A9FY79
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info