A9FJU7 (A9FJU7_SORC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylan 1,4-beta-xylosidase EMBL CAN95047.1
EC=3.2.1.37 EMBL CAN95047.1

Gene names

Name:	xynB4 EMBL CAN95047.1
Ordered Locus Names:	sce4884

Organism

Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)) [Complete proteome] [HAMAP]

Taxonomic identifier

448385 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Sorangiineae › Polyangiaceae › Sorangium

Protein attributes

Sequence length	523 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAN95047.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	xylan 1,4-beta-xylosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9FJU7 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 687F5808FE224775	FASTA	523	59,050
	10 20 30 40 50 60 MSKVENPALR GFNPDPSIVR VGDDYYIATS TFEWFPGVQI SHSKDLANWR VVARPLERYS 70 80 90 100 110 120 QLDMRGNPNS GGIWAPCLTY ADGLFHLIYT NSRRWAGSFK DVHNYLVTAP SITGPWSEPI 130 140 150 160 170 180 YLNSSGFDPS LFHDDDGRKW LVNMVWDHRP GNNPFGGILL QEYSPKEKKL VGPVENIFRG 190 200 210 220 230 240 TALGLVEGPH IYKRDGYYYL LTAEGGTFIT HAATVARSRS IHGPYEVMPN NPLISSASHP 250 260 270 280 290 300 ELRLQSAGHG SFVENKDGSW VFAHLCRRPL KNGRSTLGRE TALQGITWVE GWPRLTSGGQ 310 320 330 340 350 360 VPLDVYEGPN LARHEWPKTP ERDDFDTPTL GIEWQSPRVR PADVSSLAAR PGYLRLIGRE 370 380 390 400 410 420 SITSNFEQSL VARRQQAKHV QATTCMQFAP QHFQQMAGIV AFYSTDSFYY LYVSRADHAE 430 440 450 460 470 480 KALSVMKCER GNLTFPVEKE YVLDGVENIF LRLEIKDERI SFFYSRDGVT YHTVGWEHDA 490 500 510 520 SILSDEHAIP CGFTGNFVGM ACQDLAGTRL HADFDWFDYR EIG

References

[1]

"Complete genome sequence of the myxobacterium Sorangium cellulosum." Schneiker S., Perlova O., Kaiser O., Gerth K., Alici A., Altmeyer M.O., Bartels D., Bekel T., Beyer S., Bode E., Bode H.B., Bolten C.J., Choudhuri J.V., Doss S., Elnakady Y.A., Frank B., Gaigalat L., Goesmann A. , Groeger C., Gross F., Jelsbak L., Jelsbak L., Kalinowski J., Kegler C., Knauber T., Konietzny S., Kopp M., Krause L., Krug D., Linke B., Mahmud T., Martinez-Arias R., McHardy A.C., Merai M., Meyer F., Mormann S., Munoz-Dorado J., Perez J., Pradella S., Rachid S., Raddatz G., Rosenau F., Rueckert C., Sasse F., Scharfe M., Schuster S.C., Suen G., Treuner-Lange A., Velicer G.J., Vorholter F.-J., Weissman K.J., Welch R.D., Wenzel S.C., Whitworth D.E., Wilhelm S., Wittmann C., Bloecker H., Puehler A., Mueller R. Nat. Biotechnol. 25:1281-1289(2007) [PubMed: 17965706] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM746676 Genomic DNA. Translation: CAN95047.1.
RefSeq	YP_001615527.1. NC_010162.1.
3D structure databases
ProteinModelPortal	A9FJU7.
SMR	A9FJU7. Positions 3-521.
ModBase	Search...
Protein-protein interaction databases
STRING	A9FJU7.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5804793.
GenomeReviews	Gene locus sce4884 in contig AM746676_GR.
KEGG	scl:sce4884.
PATRIC	23668269. VBISorCel80414_5333.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG347235.
OMA	LHESKDL.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01198.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9FJU7_SORC5

Accession

Primary (citable) accession number: A9FJU7

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)