A9CJC2 (A9CJC2_AGRT5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agmatinase EMBL AAK87042.1

Gene names

Name:	speB EMBL AAK87042.1
Ordered Locus Names:	Atu1245 EMBL AAK87042.1

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970)

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	317 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Manganese By similarity. RuleBase RU003684
Sequence similarities	Belongs to the arginase family. RuleBase RU003684

Ontologies

Keywords
Ligand	Manganese RuleBase RU003684 Metal-binding RuleBase RU003684 SAAS SAAS005925
Molecular function	Hydrolase SAAS SAAS005925 RuleBase RU003684
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9CJC2 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: D422B02B9E5AD73F	FASTA	317	34,494
	10 20 30 40 50 60 MPAKTIDHAF TATTLTSAAT DPTHAGVLSF MRRKYTKNLK GVSTAIWGIP FDAATSNRPG 70 80 90 100 110 120 ARFGPQAIRR ASAIFDNDPQ YPFARDLFAH MPTIDYGDCL LDYGNHWKTP DTIEKEARRI 130 140 150 160 170 180 ISKTDYLLTL GGDHFITWPL LKAHVAKHGR LALVQFDAHQ DTWFDDGKRI DHGSFVARAV 190 200 210 220 230 240 RDGLIDPDRS IQIGIRTHAP DDFGIRILHG YEVEDMRASD IASLIVKHTG GMPAYLTFDI 250 260 270 280 290 300 DCLDPAFAPG TGTPVAGGPT SAKILSVLRG LGQLDIRGSD VVEVAPAYDH ADITAIAGAT 310 VAMYMLGLRA ERLAKAG

References

[1]

"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed: 11743194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.

[2]

"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed: 11743193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE007869 Genomic DNA. Translation: AAK87042.1.
PIR	A97511. AH2729.
RefSeq	NP_354257.1. NC_003062.2.
3D structure databases
ProteinModelPortal	A9CJC2.
ModBase	Search...
Protein-protein interaction databases
STRING	A9CJC2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1133283.
GenomeReviews	Gene locus Atu1245 in contig AE007869_GR.
KEGG	atu:Atu1245.
PATRIC	20812257. VBIAgrTum91616_1266.
Phylogenomic databases
eggNOG	COG0010.
HOGENOM	HBG391953.
OMA	MRRKYTK.
PhylomeDB	A9CJC2.
ProtClustDB	PRK02190.
Family and domain databases
InterPro	IPR005925. Agmatinase-rel. IPR006035. Ureohydrolase. IPR023696. Ureohydrolase_domain. IPR020855. Ureohydrolase_Mn_BS. [Graphical view]
Gene3D	G3DSA:3.40.800.10. Ureohydrolase. 1 hit.
KO	K01480.
PANTHER	PTHR11358. Ureohydrolase. 1 hit.
Pfam	PF00491. Arginase. 1 hit. [Graphical view]
PIRSF	PIRSF036979. Arginase. 1 hit.
TIGRFAMs	TIGR01230. Agmatinase. 1 hit.
PROSITE	PS01053. ARGINASE_1. 1 hit. PS51409. ARGINASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9CJC2_AGRT5

Accession

Primary (citable) accession number: A9CJC2

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)