A9CJ04 (A9CJ04_AGRT5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, ArsR family EMBL AAK87283.1

Gene names

Ordered Locus Names:

Atu1492 EMBL AAK87283.1

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970) [Reference proteome] [HAMAP] EMBL AAK87283.1

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium › Agrobacterium tumefaciens complex › Agrobacterium fabrum

Protein attributes

Sequence length	117 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH arsR-type DNA-binding domain. RuleBase RU000711

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000711
Ligand	DNA-binding RuleBase RU000711
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9CJ04 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 97B9F76A53D0CDD7	FASTA	117	12,584
	10 20 30 40 50 60 MDNIGAIAAL SALAQTTRLE TFRRLVQHEP EGIPAGELAR LIHVPQNTMS AHLATLARAG 70 80 90 100 110 LVKSERQSRS IIYRADLEGL RALTLFLLKD CCGGATELCA PLIAELTPCC CQEAEAL

References

[1]

"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.

[2]

"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE007869 Genomic DNA. Translation: AAK87283.1.
PIR	AD2760. B97541.
RefSeq	NP_354498.1. NC_003062.2.
3D structure databases
ProteinModelPortal	A9CJ04.
ModBase	Search...
Protein-protein interaction databases
STRING	176299.Atu1492.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1133530.
KEGG	atu:Atu1492.
PATRIC	20812767. VBIAgrTum91616_1518.
Phylogenomic databases
eggNOG	COG0640.
HOGENOM	HOG000144507.
OMA	ELCAPLI.
ProtClustDB	CLSK800370.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR001845. HTH_ArsR_DNA-bd_dom. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
PRINTS	PR00778. HTHARSR.
SMART	SM00418. HTH_ARSR. 1 hit. [Graphical view]
PROSITE	PS50987. HTH_ARSR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9CJ04_AGRT5

Accession

Primary (citable) accession number: A9CJ04

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)