A9CI62 (A9CI62_AGRT5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Secretion chaperone EMBL AAK87951.1

Gene names

Name:	csaA EMBL AAK87951.1
Ordered Locus Names:	Atu2208 EMBL AAK87951.1

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970) [Reference proteome] [HAMAP] EMBL AAK87951.1

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium › Agrobacterium tumefaciens complex › Agrobacterium fabrum

Protein attributes

Sequence length	113 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 tRNA-binding domain. SAAS SAAS002547

Ontologies

Keywords
Ligand	RNA-binding tRNA-binding SAAS SAAS002547
Technical term	3D-structure PDB 2Q2H PDB 2Q2I Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	tRNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9CI62 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 0036CD9A84314110	FASTA	113	12,222
	10 20 30 40 50 60 MSGEISYADF EKVDIRVGTI VEAVPFPEAR KPAIKVKIDF GPEIGIKKSS AQITVHYTPE 70 80 90 100 110 SLVGRQVLGV VNFPPRQIGP FRSEVLTLGF ADANGDIVLA AVERPVPNGE KMC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.
[2]	"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.
[3]	"Phage display and crystallographic analysis reveals potential substrate/binding site interactions in the protein secretion chaperone CsaA from Agrobacterium tumefaciens." Feldman A.R., Shapova Y.A., Wu S.S., Oliver D.C., Heller M., McIntosh L.P., Scott J.K., Paetzel M. J. Mol. Biol. 379:457-470(2008) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE007869 Genomic DNA. Translation: AAK87951.1.

PIR

AG2847.
F97624.

RefSeq

NP_355166.1. NC_003062.2.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2Q2H	X-ray	1.65	A/B	2-113	[»]
2Q2I	X-ray	1.55	A/B	1-113	[»]

ProteinModelPortal

A9CI62.

SMR

A9CI62. Positions 2-113.

ModBase

Search...

Protein-protein interaction databases

STRING

176299.Atu2208.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1134246.

KEGG

atu:Atu2208.

PATRIC

20814197. VBIAgrTum91616_2218.

Phylogenomic databases

eggNOG

COG0073.

HOGENOM

HOG000269896.

KO

K06878.

OMA

AQITVHY.

Family and domain databases

Gene3D

2.40.50.140. 1 hit.

InterPro

IPR012340. NA-bd_OB-fold.
IPR008231. Secretion_chaperone_CsaA.
IPR002547. tRNA-bd_dom.
[Graphical view]

Pfam

PF01588. tRNA_bind. 1 hit.
[Graphical view]

SUPFAM

SSF50249. Nucleic_acid_OB. 1 hit.

TIGRFAMs

TIGR02222. chap_CsaA. 1 hit.

PROSITE

PS50886. TRBD. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

EvolutionaryTrace

A9CI62.

Entry information

Entry name

A9CI62_AGRT5

Accession

Primary (citable) accession number: A9CI62

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)