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Protein
Submitted name:

Oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenase E1 componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:Atu2636Imported
OrganismiAgrobacterium tumefaciens (strain C58 / ATCC 33970)Imported
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
ProteomesiUP000000813: Chromosome circular

Interactioni

Protein-protein interaction databases

STRINGi176299.Atu2636.

Structurei

3D structure databases

ProteinModelPortaliA9CHK1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

A9CHK1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARQEANEQF QITSFLDGAN AAYIEQLYAR YEEDPSSVSP EWQSFFKALS
60 70 80 90 100
DNPEDVKKAA KGASWKRANW PIPANGELVS ALDGNWATVE KAIEKKVQAK
110 120 130 140 150
AEAKSADTGK PVSEAEVLQA TRDSVRAIMM IRAYRMRGHL HAKLDPLGIA
160 170 180 190 200
SAVEDYNELS PKSYGFEESD YDRKIFIDNV LGLEYATVRE MVEILERTYC
210 220 230 240 250
STLGVEFMHM SNPEEKGWIQ ERIEGPDKGV DFTPEGKKAI LSKLVEAEGY
260 270 280 290 300
EQFLDVRFKG TKRFGLDGGE SLIPALEQII KRGGQDGLEE VVLGMAHRGR
310 320 330 340 350
LNVLTNVMGK PHRAVFHEFK GGSFKPDDVE GSGDVKYHLG ASSDREFDGN
360 370 380 390 400
KVHLSLTANP SHLEIVNPVV MGKARAKQDQ LAKTWDGDII PLSERAKVLP
410 420 430 440 450
LLLHGDAAFA GQGVVAEILG LSGLRGHRVA GTMHFIINNQ IGFTTNPAFS
460 470 480 490 500
RSSPYPSDVA KMIEAPIFHV NGDDPEAVVY AAKVATEYRM KFHKPVVIDM
510 520 530 540 550
FCYRRFGHNE GDEPAFTQPK MYKVIRGHKT VARIYADRLI AEGLITEGDF
560 570 580 590 600
EKVKADWRAH LEQEFEAGQS YKPNKADWLD GQWSGLRAAD NADEQRRGKT
610 620 630 640 650
GVPMKQLKEI GKKLSTIPEG FTAHRTIQRF MENRSQMIET GEGIDWAMAE
660 670 680 690 700
ALAFGSLVVD GHKIRLSGQD CERGTFSQRH SVLYDQETEE RYIPLANLAP
710 720 730 740 750
TQARYEVINS MLSEEAVLGF EYGYSLARPN ALTLWEAQFG DFANGAQVVF
760 770 780 790 800
DQFISSGERK WLRMSGLVCL LPHGYEGQGP EHSSARLERW LQMCAEDNMQ
810 820 830 840 850
VANVTTPANY FHILRRQMKR DFRKPLILMT PKSLLRHKRA TSSLAELAGE
860 870 880 890 900
SSFHRLLWDD AEVIKDGPIK LQKDAKIRRV VMCTGKVYYD LLEEREKRGI
910 920 930 940 950
DDVYLLRVEQ LYPFPAKALI NELSRFRHAE MVWCQEEPKN MGSWSFIDPY
960 970 980 990
LEWVLAHIDA KYQKVRYTGR PAAASPATGL MSKHLAQLAA FLEDALGE
Length:998
Mass (Da):112,240
Last modified:January 15, 2008 - v1
Checksum:i0EF4EA95EBF7970E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007869 Genomic DNA. Translation: AAK88357.2.
RefSeqiNP_355572.2. NC_003062.2.

Genome annotation databases

EnsemblBacteriaiAAK88357; AAK88357; Atu2636.
GeneIDi1140053.
KEGGiatu:Atu2636.
PATRICi20815053. VBIAgrTum91616_2639.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007869 Genomic DNA. Translation: AAK88357.2.
RefSeqiNP_355572.2. NC_003062.2.

3D structure databases

ProteinModelPortaliA9CHK1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi176299.Atu2636.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK88357; AAK88357; Atu2636.
GeneIDi1140053.
KEGGiatu:Atu2636.
PATRICi20815053. VBIAgrTum91616_2639.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259586.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970Imported.

Entry informationi

Entry nameiA9CHK1_AGRT5
AccessioniPrimary (citable) accession number: A9CHK1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: January 7, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.