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Protein
Submitted name:

Uncharacterized protein

Gene

Atu4242

Organism
Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciAGRO:ATU4242-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Atu4242Imported
OrganismiAgrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))Imported
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
Proteomesi
  • UP000000813 Componenti: Chromosome linear

Interactioni

Protein-protein interaction databases

STRINGi176299.Atu4242.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2AP6X-ray2.50A/B/C/D/E/F/G/H1-103[»]
ProteinModelPortaliA9CGA4.
SMRiA9CGA4. Positions 1-104.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA9CGA4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 102100NIPSNAPInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG41060EE. Bacteria.
ENOG410ZXCG. LUCA.
HOGENOMiHOG000269058.
OrthoDBiEOG6MWNF2.

Family and domain databases

InterProiIPR011008. Dimeric_a/b-barrel.
IPR012577. NIPSNAP.
[Graphical view]
PfamiPF07978. NIPSNAP. 1 hit.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 1 hit.

Sequencei

Sequence statusi: Complete.

A9CGA4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFYEIRTYRL KNGAIPAYLK VVEDEGIEIQ KSHLGELVGY FFSEIGPINE
60 70 80 90 100
IVHIWAFSSL DDRAERRARL MADPRWLSFL PKIRDLIEVA ENKIMKPARF

SPLM
Length:104
Mass (Da):12,169
Last modified:January 15, 2008 - v1
Checksum:i9F45C848C1580EC9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007870 Genomic DNA. Translation: AAK89197.1.
PIRiAF3077.
C98209.
RefSeqiNP_356412.1. NC_003063.2.
WP_010973675.1. NC_003063.2.

Genome annotation databases

EnsemblBacteriaiAAK89197; AAK89197; Atu4242.
GeneIDi1136116.
KEGGiatu:Atu4242.
PATRICi20817907. VBIAgrTum91616_4049.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE007870 Genomic DNA. Translation: AAK89197.1.
PIRiAF3077.
C98209.
RefSeqiNP_356412.1. NC_003063.2.
WP_010973675.1. NC_003063.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2AP6X-ray2.50A/B/C/D/E/F/G/H1-103[»]
ProteinModelPortaliA9CGA4.
SMRiA9CGA4. Positions 1-104.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi176299.Atu4242.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK89197; AAK89197; Atu4242.
GeneIDi1136116.
KEGGiatu:Atu4242.
PATRICi20817907. VBIAgrTum91616_4049.

Phylogenomic databases

eggNOGiENOG41060EE. Bacteria.
ENOG410ZXCG. LUCA.
HOGENOMiHOG000269058.
OrthoDBiEOG6MWNF2.

Enzyme and pathway databases

BioCyciAGRO:ATU4242-MONOMER.

Miscellaneous databases

EvolutionaryTraceiA9CGA4.

Family and domain databases

InterProiIPR011008. Dimeric_a/b-barrel.
IPR012577. NIPSNAP.
[Graphical view]
PfamiPF07978. NIPSNAP. 1 hit.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C58 / ATCC 33970Imported.
  3. "Crystal structure of a Hypothetical protein Atu4242 from Agrobacterium tumefaciens (strain C58 / ATCC 3 NESG Target ATR43."
    Benach J., Kuzin A.P., Forouhar F., Abashidze M., Vorobiev S.M., Rong X., Acton T.B., Montelione G.T., Hunt J.F.
    Submitted (AUG-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) OF 1-103.

Entry informationi

Entry nameiA9CGA4_AGRFC
AccessioniPrimary (citable) accession number: A9CGA4
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: May 11, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.