A9CG89 (A9CG89_AGRT5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sarcosine oxidase delta subunit EMBL AAK89216.1

Gene names

Name:	soxD EMBL AAK89216.1
Ordered Locus Names:	Atu4223 EMBL AAK89216.1

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970)

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	91 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	tetrahydrofolate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	sarcosine oxidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9CG89 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 4452EBC2E08F595D	FASTA	91	10,243
	10 20 30 40 50 60 MASLVSCPHC GPRPKEEFTV KGAALQRPAA DAGSDEWFDY VYLRDNPRGS YEEYWHHTSG 70 80 90 CRRWLVVARD TVTHEISACR DAAEKTKVTS A

References

[1]

"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed: 11743194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.

[2]

"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed: 11743193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE007870 Genomic DNA. Translation: AAK89216.1.
PIR	AC3075. F98211.
RefSeq	NP_356431.1. NC_003063.2.
3D structure databases
ProteinModelPortal	A9CG89.
ModBase	Search...
Protein-protein interaction databases
STRING	A9CG89.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1136097.
GenomeReviews	Gene locus Atu4223 in contig AE007870_GR.
KEGG	atu:Atu4223.
PATRIC	20817868. VBIAgrTum91616_4030.
Phylogenomic databases
eggNOG	COG4311.
HOGENOM	HBG299493.
OMA	WFDYVYL.
ProtClustDB	CLSK784603.
Family and domain databases
InterPro	IPR006279. SoxD. [Graphical view]
KO	K00304.
Pfam	PF04267. SoxD. 1 hit. [Graphical view]
TIGRFAMs	TIGR01374. SoxD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9CG89_AGRT5

Accession

Primary (citable) accession number: A9CG89

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)