A9CEP1 (A9CEP1_AGRT5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-L-arabinofuranosidase EMBL AAK90279.1

Gene names

Name:	arfA EMBL AAK90279.1
Ordered Locus Names:	Atu3104 EMBL AAK90279.1

Organism

Agrobacterium tumefaciens (strain C58 / ATCC 33970)

Taxonomic identifier

176299 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	503 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	L-arabinose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9CEP1 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 3514F976D1854748	FASTA	503	56,496
	10 20 30 40 50 60 MKARVSVHRD FRIGRIDDRL YSAFIEHMGR AIYGGIYEPG HPQADANGFR KDVLKFVQDL 70 80 90 100 110 120 KIPAIRYPGG NFVSAYRWED GIGPRDQRPI RLDLAWRSKE TNQIGINEFA DWAQMAGIEM 130 140 150 160 170 180 MLAVNLGSRG LDDARNFLEY VNFPGGTALS DLRRSHGTEK PHGVKMWCLG NEMDGPWQIG 190 200 210 220 230 240 HKTAVEYGRL ANETAKAFKG FDPTIEAIVC GSSNDGMPTY PEWEREVLEE CYENVDHISL 250 260 270 280 290 300 HKYFGNNSRD TLNYFGKIEE TGRYIQTIAG VIDYVKAKKR AKNDVSICFD EWNVWYHIRE 310 320 330 340 350 360 DDGKRIKSWD WPEAPALLEE TYNFEDALFV AGLLNEFIRR SDRVRIACIA QLVNVIAPIR 370 380 390 400 410 420 AEKNGPAWRQ TIYYPYQFAS LYGRGVALNV AVDCPTYDCN AADDVKYLDV AGVYDEAEGM 430 440 450 460 470 480 VTLFVLNRHL TEAADINVGL TGFSSATLDL HLAMAGYDLR VGNGPDQPDR VVPVPGSGVG 490 500 VEDGALKGSV SALSYHVLRL KVQ

References

[1]

"The genome of the natural genetic engineer Agrobacterium tumefaciens C58." Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J. , Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W. Science 294:2317-2323(2001) [PubMed: 11743193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

[2]

"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58." Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C. , Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S. Science 294:2323-2328(2001) [PubMed: 11743194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C58 / ATCC 33970.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE007870 Genomic DNA. Translation: AAK90279.1.
PIR	AB2938. E98344.
RefSeq	NP_357494.1. NC_003063.2.
3D structure databases
ProteinModelPortal	A9CEP1.
SMR	A9CEP1. Positions 2-501.
ModBase	Search...
Protein-protein interaction databases
STRING	A9CEP1.
Protein family/group databases
CAZy	GH51. Glycoside Hydrolase Family 51.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1134906.
GenomeReviews	Gene locus Atu3104 in contig AE007870_GR.
KEGG	atu:Atu3104.
PATRIC	20815670. VBIAgrTum91616_2947.
Phylogenomic databases
eggNOG	COG3534.
HOGENOM	HBG654651.
OMA	WQLGHKS.
Family and domain databases
InterPro	IPR010720. Alpha-L-AF_C. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01209.
Pfam	PF06964. Alpha-L-AF_C. 1 hit. [Graphical view]
SMART	SM00813. Alpha-L-AF_C. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9CEP1_AGRT5

Accession

Primary (citable) accession number: A9CEP1

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)