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Protein

Glutamate-1-semialdehyde 2,1-aminomutase

Gene

hemL

Organism
Delftia acidovorans (strain DSM 14801 / SPH-1)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

(S)-4-amino-5-oxopentanoate = 5-aminolevulinate.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

Pathwayi: protoporphyrin-IX biosynthesis

This protein is involved in step 2 of the subpathway that synthesizes 5-aminolevulinate from L-glutamyl-tRNA(Glu).UniRule annotation
Proteins known to be involved in the 2 steps of the subpathway in this organism are:
  1. Glutamyl-tRNA reductase (hemA)
  2. Glutamate-1-semialdehyde 2,1-aminomutase (hemL)
This subpathway is part of the pathway protoporphyrin-IX biosynthesis, which is itself part of Porphyrin-containing compound metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes 5-aminolevulinate from L-glutamyl-tRNA(Glu), the pathway protoporphyrin-IX biosynthesis and in Porphyrin-containing compound metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processPorphyrin biosynthesis
LigandPyridoxal phosphate

Enzyme and pathway databases

UniPathwayiUPA00251; UER00317

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate-1-semialdehyde 2,1-aminomutaseUniRule annotation (EC:5.4.3.8UniRule annotation)
Short name:
GSAUniRule annotation
Alternative name(s):
Glutamate-1-semialdehyde aminotransferaseUniRule annotation
Short name:
GSA-ATUniRule annotation
Gene namesi
Name:hemLUniRule annotation
Ordered Locus Names:Daci_1569
OrganismiDelftia acidovorans (strain DSM 14801 / SPH-1)
Taxonomic identifieri398578 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeDelftia
Proteomesi
  • UP000000784 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003823041 – 438Glutamate-1-semialdehyde 2,1-aminomutaseAdd BLAST438

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei278N6-(pyridoxal phosphate)lysineUniRule annotation1

Proteomic databases

PRIDEiA9BY74

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi398578.Daci_1569

Structurei

3D structure databases

ProteinModelPortaliA9BY74
SMRiA9BY74
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CDM Bacteria
COG0001 LUCA
HOGENOMiHOG000020210
KOiK01845
OMAiWGPLIFG

Family and domain databases

CDDicd00610 OAT_like, 1 hit
Gene3Di3.40.640.10, 1 hit
3.90.1150.10, 2 hits
HAMAPiMF_00375 HemL_aminotrans_3, 1 hit
InterProiView protein in InterPro
IPR004639 4pyrrol_synth_GluAld_NH2Trfase
IPR005814 Aminotrans_3
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00202 Aminotran_3, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR00713 hemL, 1 hit

Sequencei

Sequence statusi: Complete.

A9BY74-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADSCTMTTD LNIPLFERAK AVIPGGVNSP VRAFNAVGGT PRFVRRAQGA
60 70 80 90 100
HFWDENAQQF TDYIGSWGPM ILGHGHPEVM AAVQAAALEG FSFGAPTERE
110 120 130 140 150
VVLAEKILSL MPSMDMVRMV SSGTEAGMSA LRLARGFTGR NKIIKFNGCY
160 170 180 190 200
HGHADALLVK AGSGLATFGA SSSAGVPQDV VKDTVVLEYN DVGQLEEAFA
210 220 230 240 250
QFGDQIACVI MEPIAGNMNF VRASVPFTRR IRELTREHGA LMVYDEVMTG
260 270 280 290 300
FRVALGSAQS LYAQHIEGFA PDITVLGKVI GGGMPMAAFG ARREIMEKLS
310 320 330 340 350
PLGPVYQAGT LSGNPIATAC GLKTLELISE PGFHDALHAK TGRLMAGFKA
360 370 380 390 400
EADAAGVPFS VDHQGGLFGF YLLPELPSTW TEVMKTDGAR FNRFFHGMLE
410 420 430
RGHYFAPALY EAGFVSAAHT DADIDKTIEA AREVFKTL
Length:438
Mass (Da):46,977
Last modified:January 15, 2008 - v1
Checksum:iA4FBE794778D0CBE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000884 Genomic DNA Translation: ABX34213.1

Genome annotation databases

EnsemblBacteriaiABX34213; ABX34213; Daci_1569
KEGGidac:Daci_1569

Similar proteinsi

Entry informationi

Entry nameiGSA_DELAS
AccessioniPrimary (citable) accession number: A9BY74
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 1, 2009
Last sequence update: January 15, 2008
Last modified: May 23, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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