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A9BQJ1 (MNMG_DELAS) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
Alternative name(s):
Glucose-inhibited division protein A
Gene names
Name:mnmG
Synonyms:gidA
Ordered Locus Names:Daci_0046
OrganismDelftia acidovorans (strain DSM 14801 / SPH-1) [Complete proteome] [HAMAP]
Taxonomic identifier398578 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeDelftia

Protein attributes

Sequence length659 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34 By similarity. HAMAP-Rule MF_00129

Cofactor

FAD By similarity. HAMAP-Rule MF_00129

Subunit structure

Homodimer By similarity. Heterotetramer of two MnmE and two MnmG subunits By similarity. HAMAP-Rule MF_00129

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00129.

Sequence similarities

Belongs to the MnmG family.

Ontologies

Keywords
   Biological processtRNA processing
   Cellular componentCytoplasm
   LigandFAD
Flavoprotein
NAD
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtRNA wobble uridine modification

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionflavin adenine dinucleotide binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 659659tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG HAMAP-Rule MF_00129
PRO_1000095649

Regions

Nucleotide binding13 – 186FAD By similarity
Nucleotide binding281 – 29515NAD Potential

Sequences

Sequence LengthMass (Da)Tools
A9BQJ1 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 765C932EFD07B1CE

FASTA65972,631
        10         20         30         40         50         60 
MLYPQEFDVI VVGGGHAGTE AALAAARMGC RTLLLSHNIE TLGQMSCNPS IGGIGKGHLV 

        70         80         90        100        110        120 
KEVDALGGAM ALATDIGGIQ FRILNSSKGP AVRATRAQAD RILYKAAIRD MLENQPNLWL 

       130        140        150        160        170        180 
FQQAVDDLMV EGDRVVGAVT QVGVRFRSRT VVLTAGTFLD GKIHVGLNNY AAGRAGDPPA 

       190        200        210        220        230        240 
VSLSSRLKEL QLPQGRLKTG TPPRLDGRSI DFSQCEEQPG DGMPGGVNEG VLPVFSFIGN 

       250        260        270        280        290        300 
AAMHPRQMPC WITHTNERTH DIIRSGFDRS PMFTGKIEGV GPRYCPSVED KINRFADKES 

       310        320        330        340        350        360 
HQIFLEPEGL TTNEFYPNGI STSLPFDIQY ELVRSMKGLE NAHILRPGYA IEYDYFDPRS 

       370        380        390        400        410        420 
LKSSFETRQI QGLFFAGQIN GTTGYEEAAA QGLFAGLNAA LQCRGQEAWL PRRDEAYLGV 

       430        440        450        460        470        480 
LVDDLITKGV TEPYRMFTSR AEFRLQLRED NADMRLTEAG RAMGLVDDAR WDAFSRKRDA 

       490        500        510        520        530        540 
VSRETERLKS TWVNPRIVTP EESERVLGKS IEREYNLFDL LRRPDVGYGK LMSLNEGRYA 

       550        560        570        580        590        600 
SADVQPDVLG DLSASVVEQV EIAAKYAGYI DRQKDEVQRA AHFENLRLPA ELDYMQVPAL 

       610        620        630        640        650 
SFEVRQSLQK HRPETLGQAS RMSGVTPAAI SLLMVHLKKG GFRGFAPDVT DAKGEEASA 

« Hide

References

[1]"Complete sequence of Delftia acidovorans DSM 14801 / SPH-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Schleheck D., Richardson P.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 14801 / SPH-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000884 Genomic DNA. Translation: ABX32693.1.
RefSeqYP_001561078.1. NC_010002.1.

3D structure databases

ProteinModelPortalA9BQJ1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING398578.Daci_0046.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX32693; ABX32693; Daci_0046.
GeneID5745582.
KEGGdac:Daci_0046.
PATRIC21633881. VBIDelAci41351_0046.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0445.
HOGENOMHOG000201060.
KOK03495.
OMAYINGLST.
OrthoDBEOG6W9X6J.
ProtClustDBPRK05192.

Enzyme and pathway databases

BioCycDACI398578:GHK3-46-MONOMER.

Family and domain databases

HAMAPMF_00129. MnmG_GidA.
InterProIPR004416. GidA.
IPR026904. GidA-assoc_3.
IPR002218. GIDA-rel.
IPR020595. GIDA-rel_CS.
[Graphical view]
PfamPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc_3. 1 hit.
[Graphical view]
TIGRFAMsTIGR00136. gidA. 1 hit.
PROSITEPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMNMG_DELAS
AccessionPrimary (citable) accession number: A9BQJ1
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: January 15, 2008
Last modified: February 19, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families