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A9BMN9 (A9BMN9_DELAS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Serine hydroxymethyltransferase 3 HAMAP MF_00051
Short name=SHMT 3 HAMAP MF_00051
Short name=Serine methylase 3 HAMAP MF_00051
EC=2.1.2.1 HAMAP MF_00051
Gene names
Name:glyA3 HAMAP MF_00051
Ordered Locus Names:Daci_4955
OrganismDelftia acidovorans (strain DSM 14801 / SPH-1) [Complete proteome] [HAMAP]
Taxonomic identifier398578 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Delftia

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Interconversion of serine and glycine By similarity. RuleBase RU000585 HAMAP MF_00051

Catalytic activity

5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine. RuleBase RU000585 HAMAP MF_00051

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000585 HAMAP MF_00051

Pathway

One-carbon metabolism; tetrahydrofolate interconversion. HAMAP MF_00051

One-carbon metabolism; tetrahydrofolate pathway. RuleBase RU000585

Subunit structure

Homotetramer By similarity. HAMAP MF_00051

Subcellular location

Cytoplasm By similarity HAMAP MF_00051.

Sequence similarities

Belongs to the SHMT family. RuleBase RU004104 HAMAP MF_00051

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue2291N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_00051

Sequences

Sequence LengthMass (Da)Tools
A9BMN9 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 136175BACDB11C3B

FASTA41544,657
        10         20         30         40         50         60 
MFQRTNTVEK VDAEVFAAIQ AENLRQQEHI ELIASENYCS PAVMEAQGSQ LTNKYAEGYP 

        70         80         90        100        110        120 
GKRYYGGCEN VDVVEQLAID RVKKLFGAEA ANVQPNSGSQ ANQAVLMAFA KPGDTIMGMS 

       130        140        150        160        170        180 
LAEGGHLTHG MPLNMSGKWF NVVSYGLNAE EAIDYDKMEA LAREHKPRII VAGASAYALA 

       190        200        210        220        230        240 
IDFERFAKIA KEVGAIFWVD MAHYAGLIAA GVYPNPVPHA DVVTTTTHKS LRGPRGGVIL 

       250        260        270        280        290        300 
MKAEHEKAIN SAIFPGLQGG PLMHVIAGKA VAFKEALSPE FKTYQEQVVK NAKVVAETLT 

       310        320        330        340        350        360 
ARGLRIVSGR TESHVMLVDL RAKGITGKAA EAALGAAHMT INKNSIPNDP EKPMVTSGIR 

       370        380        390        400        410 
VGTPAMTTRG FKEEEARLTA NLLADVLENP ADEANLARVR AQVAELTARF PVYGA

« Hide

References

[1]"Complete sequence of Delftia acidovorans DSM 14801 / SPH-1."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Schleheck D., Richardson P.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000884 Genomic DNA. Translation: ABX37584.1.
RefSeqYP_001565969.1. NC_010002.1.

3D structure databases

ProteinModelPortalA9BMN9.
SMRA9BMN9. Positions 1-414.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9BMN9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5750566.
GenomeReviewsGene locus Daci_4955 in contig CP000884_GR.
KEGGdac:Daci_4955.
PATRIC21643929. VBIDelAci41351_4998.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG301263.
OMAAHMTINK.
ProtClustDBCLSK2797120.

Family and domain databases

HAMAPMF_00051. SHMT.
[Tree]
InterProIPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR001085. Ser_HO-MeTrfase.
IPR019798. Ser_HO-MeTrfase_PLP_BS.
[Graphical view]
Gene3DG3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KOK00600.
PANTHERPTHR11680. Gly_HO-Metrfase. 1 hit.
PfamPF00464. SHMT. 1 hit.
[Graphical view]
PIRSFPIRSF000412. SHMT. 1 hit.
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITEPS00096. SHMT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9BMN9_DELAS
AccessionPrimary (citable) accession number: A9BMN9
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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