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A9BI24 (A9BI24_PETMO) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Aspartate--tRNA ligase HAMAP-Rule MF_00044
EC=6.1.1.12 HAMAP-Rule MF_00044
Alternative name(s):
Aspartyl-tRNA synthetase HAMAP-Rule MF_00044
Gene names
Name:aspS HAMAP-Rule MF_00044
Ordered Locus Names:Pmob_1621 EMBL ABX32315.1
OrganismPetrotoga mobilis (strain DSM 10674 / SJ95) [Complete proteome] [HAMAP] EMBL ABX32315.1
Taxonomic identifier403833 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Petrotoga ›

Protein attributes

Sequence length599 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp). HAMAP-Rule MF_00044

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00044 SAAS SAAS004524

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00044 SAAS SAAS004524.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746 HAMAP-Rule MF_00044

Sequences

Sequence LengthMass (Da)Tools
A9BI24 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: CFBA012E8101C379

FASTA59969,165
        10         20         30         40         50         60 
MFQKRTHTCG ELNENDIDKI VILNGWIDRI RDLGGIIFVL IRDRYGKTQA VFDSSDNYTL 

        70         80         90        100        110        120 
YQKALKLKNE YVVSIQGKVR VRPEKDKNPN MVTGNIEILA TNLEILSESE TPPIYVNIEE 

       130        140        150        160        170        180 
DISENLRLKY RYLDLRKERM QRNLILRHKV MKITRDTLSA EGFLEIETPY LTKSTPEGAR 

       190        200        210        220        230        240 
DFLVPSRLKP GNFYALPQSP QLFKQLLMVS GFDKYFQIAR CFRDEDFRAD RQPEFTQIDI 

       250        260        270        280        290        300 
EQSFVEKEDI FALTEKLIKE IFEKSLNYNG LEIPFQKYTY DEVIQKYGSD KPDIRYGMEF 

       310        320        330        340        350        360 
IDLTAYFQNT EANFIKNGID KGLILKGFIV PDRSNNFSRK KFDDLTEFAK EQGSSGLIWI 

       370        380        390        400        410        420 
ACDKEMRSNI KKAAAKEINI LVERGIMKEG DVLFAILEET DKIDQILGQL RIKMIKEEFE 

       430        440        450        460        470        480 
KKSGFSIIWV TDFPMFSWNE EEQRIVAEHH PFTMPNLDDL AKYENKDPLK IKSQSYDLVI 

       490        500        510        520        530        540 
NGYEIASGSI RIHKQDVQEK VFDILGLSKE EAQEKFGFLL EAFKYGAPPH GGIAIGMDRL 

       550        560        570        580        590 
VSILVGEESI KEVIAFPKTA SGTDPMTNAP SEVSEKQLEE LHLALKKINE SEKQNDSKS

« Hide

References

[1]"Complete sequence of Petroga mobilis SJ95."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Noll K., Richardson P.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 10674 / SJ95.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000879 Genomic DNA. Translation: ABX32315.1.
RefSeqYP_001568638.1. NC_010003.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING403833.Pmob_1621.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX32315; ABX32315; Pmob_1621.
GeneID5758000.
KEGGpmo:Pmob_1621.
PATRIC22921054. VBIPetMob40494_1744.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0173.
HOGENOMHOG000275159.
KOK01876.
OMAQEWAKQR.
ProtClustDBPRK00476.

Enzyme and pathway databases

BioCycPMOB403833:GH51-1676-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.30.1360.30. 1 hit.
HAMAPMF_00044_B. Asp_tRNA_synth_B.
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004524. Asp-tRNA-ligase_IIb_bac/mt.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR004115. GAD_dom.
IPR012340. NA-bd_OB-fold.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
PANTHERPTHR22594. PTHR22594. 1 hit.
PTHR22594:SF5. PTHR22594:SF5. 1 hit.
PfamPF02938. GAD. 1 hit.
PF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF55261. SSF55261. 1 hit.
TIGRFAMsTIGR00459. aspS_bact. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9BI24_PETMO
AccessionPrimary (citable) accession number: A9BI24
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info