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A9BHE4 (A9BHE4_PETMO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:Pmob_0829
OrganismPetrotoga mobilis (strain DSM 10674 / SJ95) [Complete proteome] [HAMAP]
Taxonomic identifier403833 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Petrotoga

Protein attributes

Sequence length687 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1581Proton donor By similarity PIRSR PIRSR001084-1
Active site3141Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1231Zinc By similarity PIRSR PIRSR001084-3
Metal binding1631Zinc By similarity PIRSR PIRSR001084-3
Metal binding1651Zinc By similarity PIRSR PIRSR001084-3
Metal binding1681Zinc By similarity PIRSR PIRSR001084-3
Binding site1191Substrate By similarity PIRSR PIRSR001084-2
Binding site1571Substrate By similarity PIRSR PIRSR001084-2
Binding site3221Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
A9BHE4 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 0062628F2299263A

FASTA68779,387
        10         20         30         40         50         60 
MTKKYEPINA KVTHFLHGAD YNPDQWLKYP EVLEEDIRLM KLAGCNVMSV GIFAWSTLEP 

        70         80         90        100        110        120 
EEGKFNFGWL DKVIEKLYKN GIYTILATPS GARPAWMSQK YPEVLRVGPN RVRNLHGKRH 

       130        140        150        160        170        180 
NHCYTSPVYR EKVNIINTKL AERYSNHPGV IAWHVSNEYG GECHCELCQE SFRNWLKEKY 

       190        200        210        220        230        240 
KTLENLNDAW WTAFWSHTYT DWSQIESPAP HGENLLHGLN LDWKRFVTHQ TVDFFKHEIE 

       250        260        270        280        290        300 
PLKKINPSLP VTTNFMGIYE GLDYWKFVDY VDVISWDNYP IWHSNDDYDL ACGVSMVHDL 

       310        320        330        340        350        360 
NRSLKNGKPF MLMESTPSTT NWHEVSKLKK PGMHLLSSIQ AVAHGSDTVQ YFQWRKSRGS 

       370        380        390        400        410        420 
SEKFHGAVVD HCGYENTRVF NDVKIVGETL KRLDEIIGTT VDPEVAIIFD WENRWAMKDA 

       430        440        450        460        470        480 
QGPRNIGIHY EETVKENYKP FWKNGVPVDV INMDCDFSKY KLLIAPMLYM VKQGVGEKIK 

       490        500        510        520        530        540 
EFVKNGGTFV ATYWSGIVNE TDLCFLGGFP GPLREVLGIW SEEIDALYDG ESRLVSFDNQ 

       550        560        570        580        590        600 
NELGLKGEYE AKELCDLIHL EGARSLATYK EDFYKGRPAL TVNDFSKGKA YYIASRNEEQ 

       610        620        630        640        650        660 
FNDMFYGKLI EELGLKKVVD TELPYGITAQ MRTDGENDYI FVMNFTQEEK VVELDEKKYI 

       670        680 
DLLEGETSDR KLTVPGYGVK ILKRTKS

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References

[1]"Complete sequence of Petroga mobilis SJ95."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Noll K., Richardson P.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 10674 / SJ95.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000879 Genomic DNA. Translation: ABX31553.1.
RefSeqYP_001567876.1. NC_010003.1.

3D structure databases

ProteinModelPortalA9BHE4.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9BHE4.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5757893.
GenomeReviewsGene locus Pmob_0829 in contig CP000879_GR.
KEGGpmo:Pmob_0829.
PATRIC22919278. VBIPetMob40494_0867.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG476453.
OMAHGSDTVQ.
ProtClustDBCLSK928940.

Enzyme and pathway databases

BioCycPMOB403833:PMOB_0829-MONOMER.

Family and domain databases

InterProIPR013739. Beta_galactosidase_C.
IPR013738. Beta_galactosidase_Trimer.
IPR013780. Glyco_hydro_13_b.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9BHE4_PETMO
AccessionPrimary (citable) accession number: A9BHE4
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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