A9BE12 (A9BE12_PROM4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted enzyme with a TIM-barrel fold EMBL ABX08322.1

Gene names

Ordered Locus Names:

P9211_03911

Organism

Prochlorococcus marinus (strain MIT 9211) [Complete proteome] [HAMAP] EMBL ABX08322.1

Taxonomic identifier

93059 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length	213 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Ontologies

Keywords
Ligand	Pyridoxal phosphate PIRSR PIRSR004848-1
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	25	1	N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

	Sequence		Length	Mass (Da)
	A9BE12 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: F84CBD96FE942A54	FASTA	213	24,051
	10 20 30 40 50 60 MSSPSRLSQF AGLSQLGIHL LAVSKGQPAS EIRSLFIEGQ IDFGESRLQE ALTKFDVLND 70 80 90 100 110 120 LQEIRWHFIG RLQANKVRGV VKSFDVIHSV DSIKLAKRIS RIAGEENKMP LIMFQVKFRK 130 140 150 160 170 180 DDKKTGFEVD ELLEAWTKLI TLPNVRICGL MTIPPAGLDR HGTKNLFKEC RNLADQLSLQ 190 200 210 DCSMGMSRDW EDAIEAGATW IRLGSILFGE RHK

References

[1]

"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus." Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W. PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000878 Genomic DNA. Translation: ABX08322.1.
RefSeq	YP_001550276.1. NC_009976.1.
3D structure databases
ProteinModelPortal	A9BE12.
ModBase	Search...
Protein-protein interaction databases
STRING	A9BE12.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5731730.
GenomeReviews	Gene locus P9211_03911 in contig CP000878_GR.
KEGG	pmj:P9211_03911.
PATRIC	22986262. VBIProMar136502_0416.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG289671.
OMA	AVSKTFE.
PhylomeDB	A9BE12.
ProtClustDB	CLSK919197.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9BE12_PROM4

Accession

Primary (citable) accession number: A9BE12

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)