A9BDM0 (A9BDM0_PROM4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptidyl-tRNA hydrolase HAMAP MF_00083
Short name=PTH HAMAP MF_00083
EC=3.1.1.29 HAMAP MF_00083

Gene names

Name:	pth HAMAP MF_00083
Ordered Locus Names:	P9211_02751

Organism

Prochlorococcus marinus (strain MIT 9211) [Complete proteome] [HAMAP] EMBL ABX08206.1

Taxonomic identifier

93059 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length	206 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00083
Catalytic activity	N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083
Subunit structure	Monomer By similarity. HAMAP MF_00083
Subcellular location	Cytoplasm By similarity HAMAP MF_00083.
Sequence similarities	Belongs to the PTH family. HAMAP MF_00083

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP MF_00083
Molecular function	Hydrolase HAMAP MF_00083 EMBL ABX08206.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9BDM0 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 11463BAC1639937C	FASTA	206	22,452
	10 20 30 40 50 60 MSTSADPSLL VGLGNPGSKY SSTRHNVGFM VLEKLATKEC ASFSTSKKLF GQLAEIGIGA 70 80 90 100 110 120 QKRRLLMPDT YMNESGRAVK AAMHWFGLQP NHILIIVDDI DLPLGKLRLR YQGGAGGHNG 130 140 150 160 170 180 LKSIINNLGT QNFSRLRVGI GKPVIAFEEK QVRTVSHVLG AFNSKEQLVM QSVLNEVVLG 190 200 LNLIQEVGLE KAANHLNSMH SKFTDI

References

[1]

"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus." Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W. PLoS Genet. 3:2515-2528(2007) [PubMed: 18159947] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000878 Genomic DNA. Translation: ABX08206.1.
RefSeq	YP_001550160.1. NC_009976.1.
3D structure databases
ProteinModelPortal	A9BDM0.
ModBase	Search...
Protein-protein interaction databases
STRING	A9BDM0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5730688.
GenomeReviews	Gene locus P9211_02751 in contig CP000878_GR.
KEGG	pmj:P9211_02751.
PATRIC	22985994. VBIProMar136502_0293.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG610927.
OMA	PGPRYAF.
PhylomeDB	A9BDM0.
ProtClustDB	PRK05426.
Family and domain databases
HAMAP	MF_00083. Pept_tRNA_hydro_bact. [Tree]
InterPro	IPR001328. Pept_tRNA_hydro. IPR018171. Pept_tRNA_hydro_CS. [Graphical view]
Gene3D	G3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit.
KO	K01056.
PANTHER	PTHR17224. Pept_tRNA_hydro. 1 hit.
Pfam	PF01195. Pept_tRNA_hydro. 1 hit. [Graphical view]
SUPFAM	SSF53178. Pept_tRNA_hydro. 1 hit.
TIGRFAMs	TIGR00447. Pth. 1 hit.
PROSITE	PS01195. PEPT_TRNA_HYDROL_1. 1 hit. PS01196. PEPT_TRNA_HYDROL_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9BDM0_PROM4

Accession

Primary (citable) accession number: A9BDM0

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)