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A9BCL6 (A9BCL6_PROM4) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Ordered Locus Names:P9211_16471
OrganismProchlorococcus marinus (strain MIT 9211) [Complete proteome] [HAMAP] EMBL ABX09578.1
Taxonomic identifier93059 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Prochlorales › Prochlorococcaceae › Prochlorococcus ›

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ABX09578.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A9BCL6 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 0E948E220022497E

FASTA38141,513
        10         20         30         40         50         60 
MLLDKLDPCQ RAWVEVKPAA IEANTRNIKQ RLPKQCMLMA VVKADGYGHG AQTVAKSALE 

        70         80         90        100        110        120 
GGAQSLGVAT LQEGIDLRQA GIKSPILLLG NLTNEEDLDA CLSWNLMPTI SDYREAVICH 

       130        140        150        160        170        180 
KIAEERVQTF AVHVKVDTGM TRLGCELSDA PSLLNFIDDL RFLDLEGVYS HLALADGDFD 

       190        200        210        220        230        240 
GEGGRVTFHQ KQKFDNLLKS ISLKNKSIVR HLANSAGTLR DCGLYYDMVR VGIALYGYSP 

       250        260        270        280        290        300 
IESLKNDFSL EPALAVKARI TLIREVPAGT GVSYGHTFIT KEQSRLAVVG IGYADGVGRA 

       310        320        330        340        350        360 
LSGKISVLIN GKLFPQVGAI TMDQLVIDIT GNLDISVGNV VTLLGFDQGR SLSPYYWSDI 

       370        380 
SGSIPWEILC GFKYRLPRVI V

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References

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:E231-E231(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MIT 9211.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000878 Genomic DNA. Translation: ABX09578.1.
RefSeqYP_001551532.1. NC_009976.1.

3D structure databases

ProteinModelPortalA9BCL6.
ModBaseSearch...

Protein-protein interaction databases

STRING93059.P9211_16471.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX09578; ABX09578; P9211_16471.
GeneID5731600.
KEGGpmj:P9211_16471.
PATRIC22988974. VBIProMar136502_1751.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAALYGHEP.
ProtClustDBPRK00053.

Enzyme and pathway databases

BioCycPMAR93059:GHJV-1693-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9BCL6_PROM4
AccessionPrimary (citable) accession number: A9BCL6
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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