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A9BCL6

- A9BCL6_PROM4

UniProt

A9BCL6 - A9BCL6_PROM4

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Protein
Alanine racemase
Gene
alr, P9211_16471
Organism
Prochlorococcus marinus (strain MIT 9211)
Status
Unreviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotationSAAS annotations

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei43 – 431Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei142 – 1421Substrate By similarityUniRule annotation
Active sitei274 – 2741Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei322 – 3221Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciPMAR93059:GHJV-1686-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Name:alrImported
Ordered Locus Names:P9211_16471Imported
OrganismiProchlorococcus marinus (strain MIT 9211)Imported
Taxonomic identifieri93059 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000000788: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei43 – 431N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi93059.P9211_16471.

Structurei

3D structure databases

ProteinModelPortaliA9BCL6.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0787.
HOGENOMiHOG000031444.
KOiK01775.
OMAiKSNTIPW.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.
PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9BCL6-1 [UniParc]FASTAAdd to Basket

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MLLDKLDPCQ RAWVEVKPAA IEANTRNIKQ RLPKQCMLMA VVKADGYGHG    50
AQTVAKSALE GGAQSLGVAT LQEGIDLRQA GIKSPILLLG NLTNEEDLDA 100
CLSWNLMPTI SDYREAVICH KIAEERVQTF AVHVKVDTGM TRLGCELSDA 150
PSLLNFIDDL RFLDLEGVYS HLALADGDFD GEGGRVTFHQ KQKFDNLLKS 200
ISLKNKSIVR HLANSAGTLR DCGLYYDMVR VGIALYGYSP IESLKNDFSL 250
EPALAVKARI TLIREVPAGT GVSYGHTFIT KEQSRLAVVG IGYADGVGRA 300
LSGKISVLIN GKLFPQVGAI TMDQLVIDIT GNLDISVGNV VTLLGFDQGR 350
SLSPYYWSDI SGSIPWEILC GFKYRLPRVI V 381
Length:381
Mass (Da):41,513
Last modified:January 15, 2008 - v1
Checksum:i0E948E220022497E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000878 Genomic DNA. Translation: ABX09578.1.
RefSeqiYP_001551532.1. NC_009976.1.

Genome annotation databases

EnsemblBacteriaiABX09578; ABX09578; P9211_16471.
GeneIDi5731600.
KEGGipmj:P9211_16471.
PATRICi22988974. VBIProMar136502_1751.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000878 Genomic DNA. Translation: ABX09578.1 .
RefSeqi YP_001551532.1. NC_009976.1.

3D structure databases

ProteinModelPortali A9BCL6.
ModBasei Search...

Protein-protein interaction databases

STRINGi 93059.P9211_16471.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABX09578 ; ABX09578 ; P9211_16471 .
GeneIDi 5731600.
KEGGi pmj:P9211_16471.
PATRICi 22988974. VBIProMar136502_1751.

Phylogenomic databases

eggNOGi COG0787.
HOGENOMi HOG000031444.
KOi K01775.
OMAi KSNTIPW.
OrthoDBi EOG6PP9NJ.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci PMAR93059:GHJV-1686-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9211.

Entry informationi

Entry nameiA9BCL6_PROM4
AccessioniPrimary (citable) accession number: A9BCL6
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: July 9, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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