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A9BCL6 (A9BCL6_PROM4) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site431Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2741Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1421Substrate By similarity HAMAP-Rule MF_01201
Binding site3221Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue431N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
A9BCL6 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 0E948E220022497E

FASTA38141,513
        10         20         30         40         50         60 
MLLDKLDPCQ RAWVEVKPAA IEANTRNIKQ RLPKQCMLMA VVKADGYGHG AQTVAKSALE 

        70         80         90        100        110        120 
GGAQSLGVAT LQEGIDLRQA GIKSPILLLG NLTNEEDLDA CLSWNLMPTI SDYREAVICH 

       130        140        150        160        170        180 
KIAEERVQTF AVHVKVDTGM TRLGCELSDA PSLLNFIDDL RFLDLEGVYS HLALADGDFD 

       190        200        210        220        230        240 
GEGGRVTFHQ KQKFDNLLKS ISLKNKSIVR HLANSAGTLR DCGLYYDMVR VGIALYGYSP 

       250        260        270        280        290        300 
IESLKNDFSL EPALAVKARI TLIREVPAGT GVSYGHTFIT KEQSRLAVVG IGYADGVGRA 

       310        320        330        340        350        360 
LSGKISVLIN GKLFPQVGAI TMDQLVIDIT GNLDISVGNV VTLLGFDQGR SLSPYYWSDI 

       370        380 
SGSIPWEILC GFKYRLPRVI V 

« Hide

References

[1]"Patterns and implications of gene gain and loss in the evolution of Prochlorococcus."
Kettler G.C., Martiny A.C., Huang K., Zucker J., Coleman M.L., Rodrigue S., Chen F., Lapidus A., Ferriera S., Johnson J., Steglich C., Church G.M., Richardson P., Chisholm S.W.
PLoS Genet. 3:2515-2528(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MIT 9211.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000878 Genomic DNA. Translation: ABX09578.1.
RefSeqYP_001551532.1. NC_009976.1.

3D structure databases

ProteinModelPortalA9BCL6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING93059.P9211_16471.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX09578; ABX09578; P9211_16471.
GeneID5731600.
KEGGpmj:P9211_16471.
PATRIC22988974. VBIProMar136502_1751.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMASVELWGD.
OrthoDBEOG6PP9NJ.
ProtClustDBPRK00053.

Enzyme and pathway databases

BioCycPMAR93059:GHJV-1686-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9BCL6_PROM4
AccessionPrimary (citable) accession number: A9BCL6
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: February 19, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)