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UniProtKB - A9BAY7 (GLGB_PROM4)

UniProt

A9BAY7 - GLGB_PROM4

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Prochlorococcus marinus (strain MIT 9211)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei431 – 4311NucleophileUniRule annotation
Active sitei484 – 4841Proton donorUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciPMAR93059:GHJV-1094-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:P9211_10681
OrganismiProchlorococcus marinus (strain MIT 9211)
Taxonomic identifieri93059 [NCBI]
Taxonomic lineageiBacteria › Cyanobacteria › Prochlorales › Prochlorococcaceae › Prochlorococcus ›
Proteomesi
  • UP000000788 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7597591,4-alpha-glucan branching enzyme GlgBPRO_1000147760Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi93059.P9211_10681.

Structurei

3D structure databases

ProteinModelPortaliA9BAY7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C9C. Bacteria.
COG0296. LUCA.
HOGENOMiHOG000283037.
KOiK00700.
OMAiHFPSDDF.
OrthoDBiPOG091H08D1.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB. 1 hit.
InterProiIPR006048. A-amylase/branching_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

A9BAY7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTSFVSDWM AQEGQKLSDC KHDDPFSVLG IQPFQGKWIA RIWMPEAEEV 
        60         70         80         90        100
ELLINGSLIP LTPPNHPWIF EALLDENPGS NYQVKVHRGG IKHQQYDPWS 
       110        120        130        140        150
FRDEWMGEID THLFAEGNHH HIWRRMGAHL SEMNGVCGVM FCLWAPNARS 
       160        170        180        190        200
VSVIGEVNSW DGRHHPMQKR MGGIWELFIP GLKEGALYKY EIRTQNGHCY 
       210        220        230        240        250
EKSDPYGFEH EVRPAQSSKV SRIDNFKWSD QEWITKRDSS NPLDQPISVY 
       260        270        280        290        300
EMHLGSWLHA PSDEPFIEPN GNKRTAVPAA DLKPGTRLLT YPELKQKLIK 
       310        320        330        340        350
YVKERGFTHI ELMPISEHPF DGSWGYQATG WYAPTSRYGT PNEFRAFVDA 
       360        370        380        390        400
CHSEGIGVIL DWVPGHFPKD SHGLAFFDGS HLYEHSDPRI GEHKEWGTLI 
       410        420        430        440        450
FNYSRNEVRN FLVANLVFWF EQFHIDGIRV DAVASMLYKD YLRPEGQWIP 
       460        470        480        490        500
NEDGGNENTE AVKFLQQANH VLFEHFPGAL SIAEESTTWP GVTNPTDVGG 
       510        520        530        540        550
LGFNLKWNMG WMHDMLDYFE VDPWFRQFHQ NNVTFSITYN YTENFMLALS 
       560        570        580        590        600
HDEVVHGKSH LLHKMPGDDW RKYANTRALL AYMWTHPGKK TIFMGMEFGQ 
       610        620        630        640        650
RKEWNVWDDL EWDLLGYQPH QGIQRLVDDL NVLYKSNPAL WRDDFNQYGF 
       660        670        680        690        700
QWIDCKDNKN SVISFMRRET LNNEWLIVVA NFTPESHPNY RVGVPLEGFY 
       710        720        730        740        750
EEIFNTDSDK YGGSNTGNMG GKASEKWSIH EYEDSIDLSL PPLSVLVFKY 

AQKKSPNEN
Length:759
Mass (Da):87,953
Last modified:January 15, 2008 - v1
Checksum:i6DD5F46C9793B497
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000878 Genomic DNA. Translation: ABX08999.1.
RefSeqiWP_012195620.1. NC_009976.1.

Genome annotation databases

EnsemblBacteriaiABX08999; ABX08999; P9211_10681.
KEGGipmj:P9211_10681.
PATRICi22987706. VBIProMar136502_1129.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000878 Genomic DNA. Translation: ABX08999.1.
RefSeqiWP_012195620.1. NC_009976.1.

3D structure databases

ProteinModelPortaliA9BAY7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi93059.P9211_10681.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX08999; ABX08999; P9211_10681.
KEGGipmj:P9211_10681.
PATRICi22987706. VBIProMar136502_1129.

Phylogenomic databases

eggNOGiENOG4105C9C. Bacteria.
COG0296. LUCA.
HOGENOMiHOG000283037.
KOiK00700.
OMAiHFPSDDF.
OrthoDBiPOG091H08D1.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciPMAR93059:GHJV-1094-MONOMER.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB. 1 hit.
InterProiIPR006048. A-amylase/branching_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiGLGB_PROM4
AccessioniPrimary (citable) accession number: A9BAY7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: January 15, 2008
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.