A9B687 (A9B687_HERA2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520
EC=2.7.1.16 HAMAP MF_00520

Gene names

Name:	araB HAMAP MF_00520
Ordered Locus Names:	Haur_3662

Organism

Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) [Complete proteome] [HAMAP]

Taxonomic identifier

316274 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Herpetosiphonales › Herpetosiphonaceae › Herpetosiphon

Protein attributes

Sequence length	562 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 SAAS SAAS005929
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 SAAS SAAS005929
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 SAAS SAAS005929 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 SAAS SAAS005929 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 SAAS SAAS018483 EMBL ABX06298.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9B687 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: F362E7405D2B2C5C	FASTA	562	61,303
	10 20 30 40 50 60 MSRQTYAIGV DFGTESGRAV LVDVRNGQEI ATAIYPYANG VIDEKLPGTN IRLEPDWALQ 70 80 90 100 110 120 DPNDYLDVFK ITIPAILKES GVDPANVIGI GVDFTACTML PTKADGTPLC MLPEWRNTPH 130 140 150 160 170 180 AWVKLWKHHA AQPEANQLNH LARELGYSFL DRYGGKISSE WFFPKAWQIL NEAPEVYAAA 190 200 210 220 230 240 DRLIEATDWV VWQLTGVETR NECTAGYKAM WSKSEGFPPN EFFKALDERM EQIVDQKMSR 250 260 270 280 290 300 TLLPLGAKAG GLSQQAAEWT GLLAGTAVAV ANVDAHVTLP VTGNTEIGTM VMIMGTSTCD 310 320 330 340 350 360 VMNGEHRDEL PIVEGMCGVV DGGIVPGMLG YEAGQSGVGD IFAWFIEHGV PGDYFEQAKA 370 380 390 400 410 420 EDINIHTLLE REAAKLQPGE SGLLALDWFN GNRSTLVDVE LNGLVLGMTL ATSAPEIYRA 430 440 450 460 470 480 LLEATAYGKR EIIETFNQSG VPIRKLIAAG GLPEKNHLLM QIYADVTNYE ISVIASKQAP 490 500 510 520 530 540 ALGSAMHGAV AAGVEAGGYA DIASAAKQMG RLKTETFKPI PANVEIYDQL YAEYKVLYNY 550 560 FGRGENDVMK RLRMLRHAAL TA

References

[1]

"Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Bryant D.A., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23779 / DSM 785.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000875 Genomic DNA. Translation: ABX06298.1.
RefSeq	YP_001546426.1. NC_009972.1.
3D structure databases
ProteinModelPortal	A9B687.
ModBase	Search...
Protein-protein interaction databases
STRING	A9B687.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5735523.
GenomeReviews	Gene locus Haur_3662 in contig CP000875_GR.
KEGG	hau:Haur_3662.
PATRIC	22124493. VBIHerAur93466_3765.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG312681.
OMA	NGRRTPD.
ProtClustDB	PRK04123.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018483. Carb_kinase_FGGY_CS. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
PROSITE	PS00445. FGGY_KINASES_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9B687_HERA2

Accession

Primary (citable) accession number: A9B687

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)