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A9B663 (A9B663_HERA2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084
Gene names
Ordered Locus Names:Haur_3638
OrganismHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) [Complete proteome] [HAMAP]
Taxonomic identifier316274 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Herpetosiphonales › Herpetosiphonaceae › Herpetosiphon

Protein attributes

Sequence length644 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1421Proton donor By similarity PIRSR PIRSR001084-1
Active site2971Nucleophile By similarity PIRSR PIRSR001084-1
Metal binding1071Zinc By similarity PIRSR PIRSR001084-3
Metal binding1511Zinc By similarity PIRSR PIRSR001084-3
Metal binding1531Zinc By similarity PIRSR PIRSR001084-3
Metal binding1561Zinc By similarity PIRSR PIRSR001084-3
Binding site1031Substrate By similarity PIRSR PIRSR001084-2
Binding site1411Substrate By similarity PIRSR PIRSR001084-2
Binding site3051Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
A9B663 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: AAE0CE48B0BAE588

FASTA64472,587
        10         20         30         40         50         60 
MPLGVCYYPE HWPQTWWADD AKQMQALGLE YVRIGEFAWA LMEPAAGQYD WVWLDQAIET 

        70         80         90        100        110        120 
LASQGLNIVL GTPTATPPAW LTHNQPDLMR IDAQGRRLGH GGRRQACLVN PQYIEYSRQI 

       130        140        150        160        170        180 
VTAMAERYGQ HPAVAAWQID NEIGNHGSAR CYCEHCAAAF RQWLIQRYGD LAGLNEAWGT 

       190        200        210        220        230        240 
AFWSQTYSDW QQIPLPNVPV GGGHNPSLVL DYRRFASDQQ VAYCAMQAEI LRQHSPNRTI 

       250        260        270        280        290        300 
LTNIAPGDDE INWFDMAQQV DTIAWDNYPH GFPDWQAVAM YHDHIRGLKR QPFWVMEQQP 

       310        320        330        340        350        360 
GQINWTPTNP PVPPNQVRLW SYQDAAHGAA NVLYFRWRAC WLGQEQYHSG LRDHANRPAR 

       370        380        390        400        410        420 
GSTEARIVAN EWQQHGQPEA APRKVALLVS YDDHWAQQLD PHAQGWNYWQ LLRTIHRTLT 

       430        440        450        460        470        480 
SYGVGVDIVQ RGTPLAAYQL AIAVAPMLDN PAETAGWREW VQAGGTLICT PRSLTKRRDN 

       490        500        510        520        530        540 
RTAPDGFPSG LTDLFGADVA EWSALDPAKP WAVKFGETSH TAPLWMEVLN VSHANSLATW 

       550        560        570        580        590        600 
SKSYAKGQAA ITAATYGKGL AVLMGCYPTE EILGDLLPRL WPAAQRLPNE IERIELTDGV 

       610        620        630        640 
LWFNHGEQAQ SVKLQGTWHD RLSGEQCSGD CSIESLGIRW LKPL

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References

[1]"Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Bryant D.A., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23779 / DSM 785.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000875 Genomic DNA. Translation: ABX06274.1.
RefSeqYP_001546402.1. NC_009972.1.

3D structure databases

ProteinModelPortalA9B663.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9B663.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5735499.
GenomeReviewsGene locus Haur_3638 in contig CP000875_GR.
KEGGhau:Haur_3638.
PATRIC22124445. VBIHerAur93466_3741.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG476453.
OMARIVANEW.

Family and domain databases

InterProIPR013738. Beta_galactosidase_Trimer.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9B663_HERA2
AccessionPrimary (citable) accession number: A9B663
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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