A9B4Y8 (A9B4Y8_HERA2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase catalytic region EMBL ABX05711.1

Gene names

Ordered Locus Names:

Haur_3073

Organism

Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) [Complete proteome] [HAMAP]

Taxonomic identifier

316274 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Herpetosiphonales › Herpetosiphonaceae › Herpetosiphon

Protein attributes

Sequence length	477 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9B4Y8 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 5E713659C7FFDED4	FASTA	477	55,721
	10 20 30 40 50 60 MTTSDWQTPD WVKHAVFYQI FPERFANGDR TNDPANAQPW GTSPTLYNYM GGDLQGIIDK 70 80 90 100 110 120 LDYLVDLGIN ALYLNPIFQA TTSHKYNTFD YFKIDPHFGT LETFKTLLNE AHRRGIKVIL 130 140 150 160 170 180 DAVFNHCGRG FFAFHDVIEN GVHSPYTNWF HISRFPIHPY ESRYAANYRT WWDFRELPKF 190 200 210 220 230 240 NTDNPAVRKY LLDVARYWIE LGIDGWRLDV PNEIDDHNFW REFRTIVKDI NPEAYIVGEI 250 260 270 280 290 300 WTDGSAWLQG DQFDAVMNYL FRDLCTDFFA SYRVRAADFA AGIDHLIVRY QPQVTYVQFN 310 320 330 340 350 360 LLGSHDTARF LSVAEEAGKW ALERMKLAVL FKLIFPGAPC IYYGDEIGLH GGKDPDCRRC 370 380 390 400 410 420 FPWDQPQTWQ TDLQAWTKRW VKFRHEHTAL RTGHYATLFA DNDMNIFACA RWDEQSQFVI 430 440 450 460 470 VLNNNETPWT LDLPLHAQLP SVTHYRDVQT GELYSVAEGK IREVALAPWK HLVLQAE

References

[1]

"Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Bryant D.A., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23779 / DSM 785.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000875 Genomic DNA. Translation: ABX05711.1.
RefSeq	YP_001545839.1. NC_009972.1.
3D structure databases
ProteinModelPortal	A9B4Y8.
ModBase	Search...
Protein-protein interaction databases
STRING	A9B4Y8.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5734945.
GenomeReviews	Gene locus Haur_3073 in contig CP000875_GR.
KEGG	hau:Haur_3073.
PATRIC	22123267. VBIHerAur93466_3157.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	QPGAPCI.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9B4Y8_HERA2

Accession

Primary (citable) accession number: A9B4Y8

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)