A9B3N5 (A9B3N5_HERA2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase catalytic region EMBL ABX05607.1

Gene names

Ordered Locus Names:

Haur_2969

Organism

Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) [Complete proteome] [HAMAP]

Taxonomic identifier

316274 [NCBI]

Taxonomic lineage

Bacteria › Chloroflexi › Herpetosiphonales › Herpetosiphonaceae › Herpetosiphon

Protein attributes

Sequence length	524 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABX05607.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ABX05607.1
	Chain	23 – 524	502	Potential EMBL ABX05607.1		PRO_5000286487

Sequences

	Sequence		Length	Mass (Da)
	A9B3N5 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: E340C25906E65CE8	FASTA	524	57,858
	10 20 30 40 50 60 MKKLLSGLLL AGVIVGCGGQ ATPTAVPATV TSQSTPTSQA LNPTATAATV VDNSITPTPL 70 80 90 100 110 120 PTKPTAPIFT ADDERWAGRS IYFIMIDRFA NGDPSNDNAD GFGADRSDPR RWHGGDFRGI 130 140 150 160 170 180 IERLDYIKGM GFGGIWITPV SKQNSTNAYH GYWQYDPYQI DPHFGTLEEL RELVSEAHKR 190 200 210 220 230 240 DILVMLDVVP NHMGDFLPGS KAAPPFDDPT WYHNKGNIQN YGNQQEVEDG DLLGLDDLDQ 250 260 270 280 290 300 DNPATRAELL KWIAWLKTET GLDGLRVDTA KHLPKDFLRE FDQAANTFSL AEVFSSDAGY 310 320 330 340 350 360 VAPYTEFNDA ILDYPLHSAF KESLVGGRTL LVIQRVLENA DQQYRNVHVN GTFLDNHDNE 370 380 390 400 410 420 RFLCLATGGP NADKTTQLRQ ALAVLYSLRG IPIVYYGTEQ ELNGCKDPFN REDAFELNAT 430 440 450 460 470 480 DVPVYQWISQ LNQIRQAHPA LQRGTLESRT TPSDAWAFQR TAGNDTVVVC INNTWKSLDL 490 500 510 520 AVTGLTEIAD GEVLTDALGS GQMSVKNGEM NCALQPKQVL IYTR

References

[1]

"Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Bryant D.A., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23779 / DSM 785.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000875 Genomic DNA. Translation: ABX05607.1.
RefSeq	YP_001545735.1. NC_009972.1.
3D structure databases
ProteinModelPortal	A9B3N5.
ModBase	Search...
Protein-protein interaction databases
STRING	A9B3N5.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5734841.
GenomeReviews	Gene locus Haur_2969 in contig CP000875_GR.
KEGG	hau:Haur_2969.
PATRIC	22123047. VBIHerAur93466_3047.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	FHIFGEV.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01176.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. [Graphical view]
PRINTS	PR00110. ALPHAAMYLASE.
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9B3N5_HERA2

Accession

Primary (citable) accession number: A9B3N5

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)