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A9B2L5

- A9B2L5_HERA2

UniProt

A9B2L5 - A9B2L5_HERA2

Protein

Alpha-amylase

Gene

Haur_2828

Organism
Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (15 Jan 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciHAUR316274:GHYA-2859-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Haur_2828Imported
    OrganismiHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)Imported
    Taxonomic identifieri316274 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon
    ProteomesiUP000000787: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi316274.Haur_2828.

    Structurei

    3D structure databases

    ProteinModelPortaliA9B2L5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000220639.
    KOiK05343.
    OMAiIMLAEAN.
    OrthoDBiEOG6RVFV2.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR012810. TreS/a-amylase_N.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.
    TIGRFAMsiTIGR02456. treS_nterm. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A9B2L5-1 [UniParc]FASTAAdd to Basket

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    MQNDWYKDAI FYELHVRAFQ DSNGDGNGDF RGLISRLDYL QSLGVDCLWL    50
    LPFYPSPGKD DGYDVADYCN VHPSYGTMED VVTFFEAAHS RGLRVMIDLV 100
    VNHTSDQHPW FQAARQPDSP YRDYYVWSDT NQRYRDARII FTDTERSNWA 150
    WDEVSESYYW HRFFSHQPDL NYENPAVLEE MYNIMRFWLD RGVDGFRVDA 200
    VPYLIEREGT NCENLPETHV ILRKMREFVD QHYPHCVLLA EANQWPDDVR 250
    HYFGNDDEFH MAFNFPVMPR MFMAVRKEDS TPIIDIVRQT PKIPENCQWA 300
    TFLRNHDELT LEMVTDEERD YMYREYAADP RMKINIGIRR RLAPLMDNAR 350
    RRMELMNSML LSLPGSPIIY YGDEIGMGDN IYLGDRNGVR TPMQWNGDRN 400
    AGFSAADFAR LYSPVIIDPV YGYQAINVEA QERVQSSLLN WMKRLIRVRK 450
    RYSVFGRGDI QILETQNRKV LAYLRSYADQ TVLIVNNLSR FIQPVELDLA 500
    EFAGMRLVEL IGETPFPAIA TTPYFLSLAP HGFIWFRIEG VRLALDDA 548
    Length:548
    Mass (Da):64,324
    Last modified:January 15, 2008 - v1
    Checksum:i886F3C6F7E3D578C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000875 Genomic DNA. Translation: ABX05466.1.
    RefSeqiYP_001545594.1. NC_009972.1.

    Genome annotation databases

    EnsemblBacteriaiABX05466; ABX05466; Haur_2828.
    GeneIDi5734709.
    KEGGihau:Haur_2828.
    PATRICi22122751. VBIHerAur93466_2900.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000875 Genomic DNA. Translation: ABX05466.1 .
    RefSeqi YP_001545594.1. NC_009972.1.

    3D structure databases

    ProteinModelPortali A9B2L5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316274.Haur_2828.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABX05466 ; ABX05466 ; Haur_2828 .
    GeneIDi 5734709.
    KEGGi hau:Haur_2828.
    PATRICi 22122751. VBIHerAur93466_2900.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000220639.
    KOi K05343.
    OMAi IMLAEAN.
    OrthoDBi EOG6RVFV2.

    Enzyme and pathway databases

    BioCyci HAUR316274:GHYA-2859-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR012810. TreS/a-amylase_N.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    TIGRFAMsi TIGR02456. treS_nterm. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
      , Kim E., Bryant D.A., Richardson P.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23779 / DSM 785Imported.

    Entry informationi

    Entry nameiA9B2L5_HERA2
    AccessioniPrimary (citable) accession number: A9B2L5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 15, 2008
    Last sequence update: January 15, 2008
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3