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A9B1L0

- A9B1L0_HERA2

UniProt

A9B1L0 - A9B1L0_HERA2

Protein

Xylose isomerase

Gene

xylA

Organism
Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (15 Jan 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei49 – 491UniRule annotation
    Active sitei52 – 521UniRule annotation
    Metal bindingi176 – 1761Magnesium 1UniRule annotation
    Metal bindingi212 – 2121Magnesium 1UniRule annotation
    Metal bindingi212 – 2121Magnesium 2UniRule annotation
    Metal bindingi215 – 2151Magnesium 2UniRule annotation
    Metal bindingi240 – 2401Magnesium 1UniRule annotation
    Metal bindingi282 – 2821Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciHAUR316274:GHYA-1269-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:Haur_1247Imported
    OrganismiHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)Imported
    Taxonomic identifieri316274 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon
    ProteomesiUP000000787: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi316274.Haur_1247.

    Structurei

    3D structure databases

    ProteinModelPortaliA9B1L0.
    SMRiA9B1L0. Positions 3-382.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2115.
    HOGENOMiHOG000022596.
    KOiK01805.
    OMAiSEATLIM.
    OrthoDBiEOG62NX4R.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A9B1L0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTQHKFSFGL WTVGNVGRDP FGEPVRKTLS PVEIVHLLAE VGAWGVNFHD    50
    NDLVPIDASA SQKAQIIADF KQALKDTGLV VPMATTNLFG HPAFKDGAFT 100
    SNDPAVRAYA LQKTMAAMDL GAEFGAKTYV FWGGREGSET DASKNLLEGL 150
    KWFREALNFL CDYSNAQGYG YRFALEAKPN EPRGDIFLPT TGAMLGFIQT 200
    LDQPEMVGVN PEVAHETMAG LNFTHAVAQA LDAGKLFHID LNDQNSGRYD 250
    QDYRFGAQNY KQSFFLVKLL QDAGYDGPLH FDAHAYRSED LEGVKDFARG 300
    CMRTYQILAE KVQRFNADAE IQALLAQINA PNADVEQFRG GYTPERAAAL 350
    KAYQFDRQAL GERGLGYEKL DQLTFELLMG AR 382
    Length:382
    Mass (Da):42,307
    Last modified:January 15, 2008 - v1
    Checksum:i9F71D67583FA2A44
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000875 Genomic DNA. Translation: ABX03895.1.
    RefSeqiYP_001544023.1. NC_009972.1.

    Genome annotation databases

    EnsemblBacteriaiABX03895; ABX03895; Haur_1247.
    GeneIDi5733125.
    KEGGihau:Haur_1247.
    PATRICi22119475. VBIHerAur93466_1274.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000875 Genomic DNA. Translation: ABX03895.1 .
    RefSeqi YP_001544023.1. NC_009972.1.

    3D structure databases

    ProteinModelPortali A9B1L0.
    SMRi A9B1L0. Positions 3-382.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316274.Haur_1247.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABX03895 ; ABX03895 ; Haur_1247 .
    GeneIDi 5733125.
    KEGGi hau:Haur_1247.
    PATRICi 22119475. VBIHerAur93466_1274.

    Phylogenomic databases

    eggNOGi COG2115.
    HOGENOMi HOG000022596.
    KOi K01805.
    OMAi SEATLIM.
    OrthoDBi EOG62NX4R.

    Enzyme and pathway databases

    BioCyci HAUR316274:GHYA-1269-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
      , Kim E., Bryant D.A., Richardson P.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23779 / DSM 785Imported.

    Entry informationi

    Entry nameiA9B1L0_HERA2
    AccessioniPrimary (citable) accession number: A9B1L0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 15, 2008
    Last sequence update: January 15, 2008
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3