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A9B1L0

- A9B1L0_HERA2

UniProt

A9B1L0 - A9B1L0_HERA2

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Protein
Xylose isomerase
Gene
xylA, Haur_1247
Organism
Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei49 – 491 By similarityUniRule annotation
Active sitei52 – 521 By similarityUniRule annotation
Metal bindingi176 – 1761Magnesium 1 By similarityUniRule annotation
Metal bindingi212 – 2121Magnesium 1 By similarityUniRule annotation
Metal bindingi212 – 2121Magnesium 2 By similarityUniRule annotation
Metal bindingi215 – 2151Magnesium 2 By similarityUniRule annotation
Metal bindingi240 – 2401Magnesium 1 By similarityUniRule annotation
Metal bindingi282 – 2821Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciHAUR316274:GHYA-1269-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Haur_1247Imported
OrganismiHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)Imported
Taxonomic identifieri316274 [NCBI]
Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon
ProteomesiUP000000787: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi316274.Haur_1247.

Structurei

3D structure databases

ProteinModelPortaliA9B1L0.
SMRiA9B1L0. Positions 3-382.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000022596.
KOiK01805.
OMAiSEATLIM.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9B1L0-1 [UniParc]FASTAAdd to Basket

« Hide

MTQHKFSFGL WTVGNVGRDP FGEPVRKTLS PVEIVHLLAE VGAWGVNFHD    50
NDLVPIDASA SQKAQIIADF KQALKDTGLV VPMATTNLFG HPAFKDGAFT 100
SNDPAVRAYA LQKTMAAMDL GAEFGAKTYV FWGGREGSET DASKNLLEGL 150
KWFREALNFL CDYSNAQGYG YRFALEAKPN EPRGDIFLPT TGAMLGFIQT 200
LDQPEMVGVN PEVAHETMAG LNFTHAVAQA LDAGKLFHID LNDQNSGRYD 250
QDYRFGAQNY KQSFFLVKLL QDAGYDGPLH FDAHAYRSED LEGVKDFARG 300
CMRTYQILAE KVQRFNADAE IQALLAQINA PNADVEQFRG GYTPERAAAL 350
KAYQFDRQAL GERGLGYEKL DQLTFELLMG AR 382
Length:382
Mass (Da):42,307
Last modified:January 15, 2008 - v1
Checksum:i9F71D67583FA2A44
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000875 Genomic DNA. Translation: ABX03895.1.
RefSeqiYP_001544023.1. NC_009972.1.

Genome annotation databases

EnsemblBacteriaiABX03895; ABX03895; Haur_1247.
GeneIDi5733125.
KEGGihau:Haur_1247.
PATRICi22119475. VBIHerAur93466_1274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000875 Genomic DNA. Translation: ABX03895.1 .
RefSeqi YP_001544023.1. NC_009972.1.

3D structure databases

ProteinModelPortali A9B1L0.
SMRi A9B1L0. Positions 3-382.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316274.Haur_1247.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABX03895 ; ABX03895 ; Haur_1247 .
GeneIDi 5733125.
KEGGi hau:Haur_1247.
PATRICi 22119475. VBIHerAur93466_1274.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000022596.
KOi K01805.
OMAi SEATLIM.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci HAUR316274:GHYA-1269-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
    , Kim E., Bryant D.A., Richardson P.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23779 / DSM 785.

Entry informationi

Entry nameiA9B1L0_HERA2
AccessioniPrimary (citable) accession number: A9B1L0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: September 3, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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