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A9B1L0 (A9B1L0_HERA2) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length382 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site491 By similarity HAMAP-Rule MF_00455
Active site521 By similarity HAMAP-Rule MF_00455
Metal binding1761Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2121Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2121Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2151Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2401Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2821Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
A9B1L0 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 9F71D67583FA2A44

FASTA38242,307
        10         20         30         40         50         60 
MTQHKFSFGL WTVGNVGRDP FGEPVRKTLS PVEIVHLLAE VGAWGVNFHD NDLVPIDASA 

        70         80         90        100        110        120 
SQKAQIIADF KQALKDTGLV VPMATTNLFG HPAFKDGAFT SNDPAVRAYA LQKTMAAMDL 

       130        140        150        160        170        180 
GAEFGAKTYV FWGGREGSET DASKNLLEGL KWFREALNFL CDYSNAQGYG YRFALEAKPN 

       190        200        210        220        230        240 
EPRGDIFLPT TGAMLGFIQT LDQPEMVGVN PEVAHETMAG LNFTHAVAQA LDAGKLFHID 

       250        260        270        280        290        300 
LNDQNSGRYD QDYRFGAQNY KQSFFLVKLL QDAGYDGPLH FDAHAYRSED LEGVKDFARG 

       310        320        330        340        350        360 
CMRTYQILAE KVQRFNADAE IQALLAQINA PNADVEQFRG GYTPERAAAL KAYQFDRQAL 

       370        380 
GERGLGYEKL DQLTFELLMG AR 

« Hide

References

[1]"Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Bryant D.A., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23779 / DSM 785.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000875 Genomic DNA. Translation: ABX03895.1.
RefSeqYP_001544023.1. NC_009972.1.

3D structure databases

ProteinModelPortalA9B1L0.
SMRA9B1L0. Positions 3-382.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316274.Haur_1247.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX03895; ABX03895; Haur_1247.
GeneID5733125.
KEGGhau:Haur_1247.
PATRIC22119475. VBIHerAur93466_1274.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000022596.
KOK01805.
OMASEATLIM.
OrthoDBEOG62NX4R.

Enzyme and pathway databases

BioCycHAUR316274:GHYA-1269-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02631. xylA_Arthro. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9B1L0_HERA2
AccessionPrimary (citable) accession number: A9B1L0
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: June 11, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)