Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A9B1L0

- A9B1L0_HERA2

UniProt

A9B1L0 - A9B1L0_HERA2

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Xylose isomerase

Gene

xylA

Organism
Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Note: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei49 – 491UniRule annotation
Active sitei52 – 521UniRule annotation
Metal bindingi176 – 1761Magnesium 1UniRule annotation
Metal bindingi212 – 2121Magnesium 1UniRule annotation
Metal bindingi212 – 2121Magnesium 2UniRule annotation
Metal bindingi215 – 2151Magnesium 2UniRule annotation
Metal bindingi240 – 2401Magnesium 1UniRule annotation
Metal bindingi282 – 2821Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotation, Xylose metabolismUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciHAUR316274:GHYA-1269-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Haur_1247Imported
OrganismiHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)Imported
Taxonomic identifieri316274 [NCBI]
Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon
ProteomesiUP000000787: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi316274.Haur_1247.

Structurei

3D structure databases

ProteinModelPortaliA9B1L0.
SMRiA9B1L0. Positions 3-382.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000022596.
KOiK01805.
OMAiSEATLIM.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9B1L0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTQHKFSFGL WTVGNVGRDP FGEPVRKTLS PVEIVHLLAE VGAWGVNFHD
60 70 80 90 100
NDLVPIDASA SQKAQIIADF KQALKDTGLV VPMATTNLFG HPAFKDGAFT
110 120 130 140 150
SNDPAVRAYA LQKTMAAMDL GAEFGAKTYV FWGGREGSET DASKNLLEGL
160 170 180 190 200
KWFREALNFL CDYSNAQGYG YRFALEAKPN EPRGDIFLPT TGAMLGFIQT
210 220 230 240 250
LDQPEMVGVN PEVAHETMAG LNFTHAVAQA LDAGKLFHID LNDQNSGRYD
260 270 280 290 300
QDYRFGAQNY KQSFFLVKLL QDAGYDGPLH FDAHAYRSED LEGVKDFARG
310 320 330 340 350
CMRTYQILAE KVQRFNADAE IQALLAQINA PNADVEQFRG GYTPERAAAL
360 370 380
KAYQFDRQAL GERGLGYEKL DQLTFELLMG AR
Length:382
Mass (Da):42,307
Last modified:January 15, 2008 - v1
Checksum:i9F71D67583FA2A44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000875 Genomic DNA. Translation: ABX03895.1.
RefSeqiWP_012188801.1. NC_009972.1.
YP_001544023.1. NC_009972.1.

Genome annotation databases

EnsemblBacteriaiABX03895; ABX03895; Haur_1247.
GeneIDi5733125.
KEGGihau:Haur_1247.
PATRICi22119475. VBIHerAur93466_1274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000875 Genomic DNA. Translation: ABX03895.1 .
RefSeqi WP_012188801.1. NC_009972.1.
YP_001544023.1. NC_009972.1.

3D structure databases

ProteinModelPortali A9B1L0.
SMRi A9B1L0. Positions 3-382.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316274.Haur_1247.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABX03895 ; ABX03895 ; Haur_1247 .
GeneIDi 5733125.
KEGGi hau:Haur_1247.
PATRICi 22119475. VBIHerAur93466_1274.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000022596.
KOi K01805.
OMAi SEATLIM.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci HAUR316274:GHYA-1269-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
    , Kim E., Bryant D.A., Richardson P.
    Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23779 / DSM 785Imported.

Entry informationi

Entry nameiA9B1L0_HERA2
AccessioniPrimary (citable) accession number: A9B1L0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: November 26, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3