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A9AYU3 (A9AYU3_HERA2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Licheninase EMBL ABX05071.1
EC=3.2.1.73 EMBL ABX05071.1
Gene names
Ordered Locus Names:Haur_2431
OrganismHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) [Complete proteome] [HAMAP]
Taxonomic identifier316274 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Herpetosiphonales › Herpetosiphonaceae › Herpetosiphon

Protein attributes

Sequence length543 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABX05071.1
   Molecular functionGlycosidase EMBL ABX05071.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

licheninase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3939 Potential EMBL ABX05071.1
Chain40 – 543504 Potential EMBL ABX05071.1
PRO_5000286202

Sequences

Sequence LengthMass (Da)Tools
A9AYU3 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 9F2CB13B083A9DFC

FASTA54358,642
        10         20         30         40         50         60 
MAEQPRSFFG SRLIQRAILI LAICAVIVPL FASKSSYAAA TPRRPFPQHT QYASGTIKPN 

        70         80         90        100        110        120 
HRSQAQLDSD VKAFYDVWKS RYVVRAGTSS AGNPYYRISF GSSAPNVTVS EGQGYGMVIM 

       130        140        150        160        170        180 
ALMAGYDPEA QTIFDGLWEF SRTNPSNIDS RLMGWRIPSD GSGNDSAFDG DADIAYGLIL 

       190        200        210        220        230        240 
ADAQWGSTGR INYASAANTV LDGVLSSTIG PNSRLPMLGD WVSPNGSPHS QYTPRPSDFM 

       250        260        270        280        290        300 
PSHFRDYRAF TGNATWDTVL SKTQGVVDSI QAQYSPNTGL MPDFVVQANT TPKPSPANFL 

       310        320        330        340        350        360 
ESENDGNYYY NSGRVPWRLG ADAVIFGDAA SLRQAQKISR WIEQATGGTA SNIRAGYSLN 

       370        380        390        400        410        420 
GTALPDSGYF STFFAAPFGV AAMTVPASQQ WLNRVYDAVR SNHQDYFEDT VTLQCLLLMS 

       430        440        450        460        470        480 
GNYWSPSRSS TSPTATPRPA TATPRPATAT PRPATATPRP ATATPRPATA TPRPATATPR 

       490        500        510        520        530        540 
PATATPQPAT ATPNGVAAWD GNMRAYKVGD RVSYNGRIYR CLQAHTSLST WTPEAVPALW 


QAE

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References

[1]"Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Bryant D.A., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23779 / DSM 785.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000875 Genomic DNA. Translation: ABX05071.1.
RefSeqYP_001545199.1. NC_009972.1.

3D structure databases

ProteinModelPortalA9AYU3.
SMRA9AYU3. Positions 498-542.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9AYU3.

Protein family/group databases

CAZyCBM12. Carbohydrate-Binding Module Family 12.
GH8. Glycoside Hydrolase Family 8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5734312.
GenomeReviewsGene locus Haur_2431 in contig CP000875_GR.
KEGGhau:Haur_2431.
PATRIC22121933. VBIHerAur93466_2495.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG339706.
OMADMDIAYA.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR003610. CBM_fam5/12.
IPR002037. Glyco_hydro_8.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit.
PfamPF02839. CBM_5_12. 1 hit.
PF01270. Glyco_hydro_8. 1 hit.
[Graphical view]
PRINTSPR00735. GLHYDRLASE8.
SMARTSM00495. ChtBD3. 1 hit.
[Graphical view]
SUPFAMSSF51055. CBM_5_12. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9AYU3_HERA2
AccessionPrimary (citable) accession number: A9AYU3
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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