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A9AVU7

- A9AVU7_HERA2

UniProt

A9AVU7 - A9AVU7_HERA2

Protein

Alpha-amylase

Gene

Haur_4065

Organism
Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (15 Jan 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciHAUR316274:GHYA-4108-MONOMER.

    Protein family/group databases

    CAZyiCBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Haur_4065Imported
    OrganismiHerpetosiphon aurantiacus (strain ATCC 23779 / DSM 785)Imported
    Taxonomic identifieri316274 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiChloroflexiaHerpetosiphonalesHerpetosiphonaceaeHerpetosiphon
    ProteomesiUP000000787: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3636 PotentialImportedAdd
    BLAST
    Chaini37 – 596560 PotentialImportedPRO_5000286045Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi316274.Haur_4065.

    Structurei

    3D structure databases

    ProteinModelPortaliA9AVU7.
    SMRiA9AVU7. Positions 41-486.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiGQNIFVV.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A9AVU7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSRTTRAMAR LTLFVLVVII FSVGFFGTAP RATQAQTTPR TAFVHLFEWK    50
    WTDIAKECEN WLGPKGFAAV QVSPPQEHIQ GSQWWTRYQP VSYQIQSRSG 100
    TRAEFANMVS RCKAVGVDIY VDAVINHMTG VGSGTGVAGS SYTSYNYPGN 150
    YQTQDFHHCG RNGNDDISNY QDRWEVQNCE LVNLADLKTE SDYVRGKLAA 200
    YLNDLRSLGV AGFRIDAAKH MPAADIANIM SRASNPYIYQ EVIDQGGEPI 250
    TSGEYTGNGD VTEFKYSTNI GRMFKTDKLA NMSNFGTAWG FIASDSAVVF 300
    TDNHDNQRGH GGAGNVVTFK DGKLYELANV FALAWPYGYP QVMSSYNFSN 350
    GDQGPPSSNV YNGNTADCGG SNWVCEHRWR GIANMVGFRN YTSTAFSTSN 400
    WWSNGNNQIS FSRGSLGFVA INREGSSLSR TFATGLPAGT YCDVIHGDFN 450
    NGSCSGPTIS VNSSGQATIT VAAMDSVAIH GGAKINGTNP TPVPTTPPSG 500
    SIAVTFNENA TTVWGQNVYV IGNVSALGSW NTANAVLLSS ASYPVWSKTI 550
    NLPASTAIEY KYIKKDGSGN VTWESGSNRT FTTPSSGTVT RNDTWK 596
    Length:596
    Mass (Da):64,608
    Last modified:January 15, 2008 - v1
    Checksum:iE03E668B49AB2662
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000875 Genomic DNA. Translation: ABX06697.1.
    RefSeqiYP_001546825.1. NC_009972.1.

    Genome annotation databases

    EnsemblBacteriaiABX06697; ABX06697; Haur_4065.
    GeneIDi5735923.
    KEGGihau:Haur_4065.
    PATRICi22125345. VBIHerAur93466_4186.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000875 Genomic DNA. Translation: ABX06697.1 .
    RefSeqi YP_001546825.1. NC_009972.1.

    3D structure databases

    ProteinModelPortali A9AVU7.
    SMRi A9AVU7. Positions 41-486.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316274.Haur_4065.

    Protein family/group databases

    CAZyi CBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABX06697 ; ABX06697 ; Haur_4065 .
    GeneIDi 5735923.
    KEGGi hau:Haur_4065.
    PATRICi 22125345. VBIHerAur93466_4186.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi GQNIFVV.
    OrthoDBi EOG6RZB1B.

    Enzyme and pathway databases

    BioCyci HAUR316274:GHYA-4108-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Herpetosiphon aurantiacus ATCC 23779."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
      , Kim E., Bryant D.A., Richardson P.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23779 / DSM 785Imported.

    Entry informationi

    Entry nameiA9AVU7_HERA2
    AccessioniPrimary (citable) accession number: A9AVU7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 15, 2008
    Last sequence update: January 15, 2008
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3