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A9AU40

- A9AU40_BURM1

UniProt

A9AU40 - A9AU40_BURM1

Protein
Submitted name:

DNA polymerase LigD, ligase domain protein

Gene

Bmul_6253

Organism
Burkholderia multivorans (strain ATCC 17616 / 249)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (15 Jan 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, ligase domain proteinImported
    Gene namesi
    Ordered Locus Names:Bmul_6253Imported
    Encoded oniPlasmid pBMUL01Imported
    OrganismiBurkholderia multivorans (strain ATCC 17616 / 249)Imported
    Taxonomic identifieri395019 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
    ProteomesiUP000007064: Plasmid pBMUL01

    Interactioni

    Protein-protein interaction databases

    STRINGi395019.Bmul_6253.

    Structurei

    3D structure databases

    ProteinModelPortaliA9AU40.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.
    OrthoDBiEOG6BW4VZ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A9AU40-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQRRTTAQKT RAGVVVAKNA RMSEFIAPAL AVLMSEPPPA GDWAYEIKFD    50
    GYRMLVRVDD GDVRLYTRNG HDWTSKLPHL TAVLKRLPVQ RAWLDAEAVC 100
    FAPDGRPNFS RLQEAFNSRR TTGICLVVFD LMWIDDTDLR RRPWHERRSA 150
    LTGIIGEVLR EEVRFSEAIE ADASAMLASA CELGLEGIIG KQIDAPYRSG 200
    RSDRWIKLKC VRRQEFVIGG FSRRKGATAG VRALLLGVYE EGGRLRYVGH 250
    VAPSFTPRQA REFESRLSAL GRKRSPFASA PDPEVDREFH WLKPDLVAEV 300
    AFLEWTPAGR LRHPSFCGLR ADKPARTVSR ENPASPKGAG SRR 343
    Length:343
    Mass (Da):38,582
    Last modified:January 15, 2008 - v1
    Checksum:iA0A04D19258EE321
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000871 Genomic DNA. Translation: ABX19906.1.
    RefSeqiWP_012211059.1. NC_010070.1.
    YP_001573706.1. NC_010070.1.

    Genome annotation databases

    EnsemblBacteriaiABX19906; ABX19906; Bmul_6253.
    GeneIDi5764759.
    KEGGibmu:Bmul_6253.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000871 Genomic DNA. Translation: ABX19906.1 .
    RefSeqi WP_012211059.1. NC_010070.1.
    YP_001573706.1. NC_010070.1.

    3D structure databases

    ProteinModelPortali A9AU40.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 395019.Bmul_6253.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABX19906 ; ABX19906 ; Bmul_6253 .
    GeneIDi 5764759.
    KEGGi bmu:Bmul_6253.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.
    OrthoDBi EOG6BW4VZ.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of plasmid 1 of Burkholderia multivorans ATCC 17616."
      Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
      Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17616 / 249Imported.

    Entry informationi

    Entry nameiA9AU40_BURM1
    AccessioniPrimary (citable) accession number: A9AU40
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 15, 2008
    Last sequence update: January 15, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported, PlasmidImported

    External Data

    Dasty 3