A9AU40 (A9AU40_BURM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, ligase domain protein EMBL ABX19906.1

Gene names

Ordered Locus Names:

Bmul_6253 EMBL ABX19906.1

Encoded on

Plasmid pBMUL01 EMBL ABX19906.1

Organism

Burkholderia multivorans (strain ATCC 17616 / 249) [Complete proteome] [HAMAP] EMBL ABX19906.1

Taxonomic identifier

395019 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia multivorans

Protein attributes

Sequence length	343 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABX19906.1
Technical term	Complete proteome Plasmid EMBL ABX19906.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9AU40 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: A0A04D19258EE321	FASTA	343	38,582
	10 20 30 40 50 60 MQRRTTAQKT RAGVVVAKNA RMSEFIAPAL AVLMSEPPPA GDWAYEIKFD GYRMLVRVDD 70 80 90 100 110 120 GDVRLYTRNG HDWTSKLPHL TAVLKRLPVQ RAWLDAEAVC FAPDGRPNFS RLQEAFNSRR 130 140 150 160 170 180 TTGICLVVFD LMWIDDTDLR RRPWHERRSA LTGIIGEVLR EEVRFSEAIE ADASAMLASA 190 200 210 220 230 240 CELGLEGIIG KQIDAPYRSG RSDRWIKLKC VRRQEFVIGG FSRRKGATAG VRALLLGVYE 250 260 270 280 290 300 EGGRLRYVGH VAPSFTPRQA REFESRLSAL GRKRSPFASA PDPEVDREFH WLKPDLVAEV 310 320 330 340 AFLEWTPAGR LRHPSFCGLR ADKPARTVSR ENPASPKGAG SRR

References

[1]

"Complete sequence of plasmid 1 of Burkholderia multivorans ATCC 17616." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17616 / 249.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000871 Genomic DNA. Translation: ABX19906.1.
RefSeq	YP_001573706.1. NC_010070.1.
3D structure databases
ProteinModelPortal	A9AU40.
ModBase	Search...
Protein-protein interaction databases
STRING	395019.Bmul_6253.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABX19906; ABX19906; Bmul_6253.
GeneID	5764759.
KEGG	bmu:Bmul_6253.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222509.
KO	K01971.
OMA	IKCIQSD.
ProtClustDB	CLSK899085.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9AU40_BURM1

Accession

Primary (citable) accession number: A9AU40

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)