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A9AU40 (A9AU40_BURM1) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bmul_6253 EMBL ABX19906.1
Encoded onPlasmid pBMUL01 EMBL ABX19906.1
OrganismBurkholderia multivorans (strain ATCC 17616 / 249) [Complete proteome] [HAMAP] EMBL ABX19906.1
Taxonomic identifier395019 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABX19906.1
   Technical termComplete proteome
Plasmid EMBL ABX19906.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A9AU40 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: A0A04D19258EE321

FASTA34338,582
        10         20         30         40         50         60 
MQRRTTAQKT RAGVVVAKNA RMSEFIAPAL AVLMSEPPPA GDWAYEIKFD GYRMLVRVDD 

        70         80         90        100        110        120 
GDVRLYTRNG HDWTSKLPHL TAVLKRLPVQ RAWLDAEAVC FAPDGRPNFS RLQEAFNSRR 

       130        140        150        160        170        180 
TTGICLVVFD LMWIDDTDLR RRPWHERRSA LTGIIGEVLR EEVRFSEAIE ADASAMLASA 

       190        200        210        220        230        240 
CELGLEGIIG KQIDAPYRSG RSDRWIKLKC VRRQEFVIGG FSRRKGATAG VRALLLGVYE 

       250        260        270        280        290        300 
EGGRLRYVGH VAPSFTPRQA REFESRLSAL GRKRSPFASA PDPEVDREFH WLKPDLVAEV 

       310        320        330        340 
AFLEWTPAGR LRHPSFCGLR ADKPARTVSR ENPASPKGAG SRR 

« Hide

References

[1]"Complete sequence of plasmid 1 of Burkholderia multivorans ATCC 17616."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17616 / 249.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000871 Genomic DNA. Translation: ABX19906.1.
RefSeqYP_001573706.1. NC_010070.1.

3D structure databases

ProteinModelPortalA9AU40.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395019.Bmul_6253.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX19906; ABX19906; Bmul_6253.
GeneID5764759.
KEGGbmu:Bmul_6253.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAVEVKYGQ.
OrthoDBEOG6BW4VZ.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9AU40_BURM1
AccessionPrimary (citable) accession number: A9AU40
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)