A9ATU7 (A9ATU7_BURM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase D EMBL ABX19146.1

Submitted name:
Putative ATP-dependent DNA ligase EMBL BAG47822.1

Gene names

Ordered Locus Names:

Bmul_5476 EMBL ABX19146.1, BMULJ_06021 EMBL BAG47822.1

Organism

Burkholderia multivorans (strain ATCC 17616 / 249) [Complete proteome] [HAMAP] EMBL ABX19146.1

Taxonomic identifier

395019 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia multivorans

Protein attributes

Sequence length	927 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABX19146.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9ATU7 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 61DB9CD1D929FD4A	FASTA	927	102,490
	10 20 30 40 50 60 MAGKLDPYRR KRHFDATPEP EGTRRRRAPA DAQPAERGRH PLRYVIQEHH ARRLHYDFRL 70 80 90 100 110 120 ELDGTLKSWA VPKGPSFDPS VKRLAVHVED HPLEYASFEG EIPAGHYGAG SVIVWDEGTW 130 140 150 160 170 180 TPEGGLAKAR EGYRAGKLKF RLDGEKLHGG WALVRSGRQE GRQEQWLLIK ERDDDARSAE 190 200 210 220 230 240 AYDVVAQQPG SVHDGATRGH ATNGHARARR RGEKAAGKEP DAEADADTDA DAPRARATKA 250 260 270 280 290 300 KRPPALSRVE GAVRAPLPER IAPQLATLVD APPAHGDWRY ELKFDGYRML ARIAGKGARR 310 320 330 340 350 360 RVTLMTREGR DWTPKLRALR DALAALEVDD AWLDGEAVVL GENGLPDFQL LQNALGSGQS 370 380 390 400 410 420 DAVTLFVFDL PYLNGYDLRD APLTARRAQL EPLFDAADPA RLRFSPDLGS DAAGLIANAC 430 440 450 460 470 480 DTGLEGLIGK RADARYRAGR SPAWIKLKCR RRQEFVIGGY TEPTGSRHGF GALLLGVHEP 490 500 510 520 530 540 APNGKRTRGA SPLRYVGRVG TGFDTRMLDK LAPLLREHER ASSPFDPPPQ GWSRTRVHWV 550 560 570 580 590 600 EPTLVAECEF AEWTGDGIVR QAAFVALRED KPASQIVREV ARHPTTENTM DERTSSSARR 610 620 630 640 650 660 GRAAADTHDG GQDRAQHRAQ ERAPAARGKS APDQVGQVRI THPERVLDRE SGTRKIDLAH 670 680 690 700 710 720 YWERVAPWAL PDLAGRPVSL VRAPQDIGGE LFFQKHAERR EIPFVTQHPG LDPGHGPLLS 730 740 750 760 770 780 IDSVDALIGA AQMGTIELHT WNAHASNIER PDRIVFDLDP DPALPWRTMI EAAQLVRGLL 790 800 810 820 830 840 DELGLVSFCK TSGGKGLHVV VPITRHSGWD EMKDFSRAVA QHIAGALPDR FTATMGPRHR 850 860 870 880 890 900 RGKIFIDYLR NGRGASTIAA YSVRARPGMG VSVPIDWDEV PATTGGAQWT IDTVHERLDA 910 920 LERDPWEAYA DTRQRITAAM RTRLAAR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Burkholderia multivorans ATCC 17616." Ohtsubo Y., Yamashita A., Kurokawa K., Takami H., Yuhara S., Nishiyama E., Endo R., Miyazaki R., Ono A., Yano K., Ito M., Sota M., Yuji N., Hattori M., Tsuda M. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17616 EMBL BAG47822.1 and ATCC 17616 / 249.
[2]	"Complete sequence of chromosome 3 of Burkholderia multivorans ATCC 17616." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17616 / 249.
[3]	"Complete sequence of chromosome3 of Burkholderia multivorans ATCC 17616." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 17616 EMBL ABX19146.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000870 Genomic DNA. Translation: ABX19146.1. AP009387 Genomic DNA. Translation: BAG47822.1.
RefSeq	YP_001585438.1. NC_010087.1. YP_001941812.1. NC_010801.1.
3D structure databases
SMR	A9ATU7. Positions 635-924.
ModBase	Search...
Protein-protein interaction databases
STRING	395019.Bmul_5476.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABX19146; ABX19146; Bmul_5476. BAG47822; BAG47822; BMULJ_06021.
GeneID	5770842. 6356742.
KEGG	bmj:BMULJ_06021. bmu:Bmul_5476.
PATRIC	19161091. VBIBurMul203716_0661.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3285.
HOGENOM	HOG000222509.
KO	K01971.
OMA	LVAECEF.
ProtClustDB	CLSK954720.
Enzyme and pathway databases
BioCyc	BMUL395019:GIYO-6016-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR002755. DNA_primase_S. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF01896. DNA_primase_S. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9ATU7_BURM1

Accession

Primary (citable) accession number: A9ATU7

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)