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A9ATU7 (A9ATU7_BURM1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative ATP-dependent DNA ligase EMBL BAG47822.1
Gene names
Ordered Locus Names:Bmul_5476 EMBL ABX19146.1, BMULJ_06021 EMBL BAG47822.1
OrganismBurkholderia multivorans (strain ATCC 17616 / 249) [Complete proteome] [HAMAP] EMBL ABX19146.1
Taxonomic identifier395019 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length927 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A9ATU7 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 61DB9CD1D929FD4A

FASTA927102,490
        10         20         30         40         50         60 
MAGKLDPYRR KRHFDATPEP EGTRRRRAPA DAQPAERGRH PLRYVIQEHH ARRLHYDFRL 

        70         80         90        100        110        120 
ELDGTLKSWA VPKGPSFDPS VKRLAVHVED HPLEYASFEG EIPAGHYGAG SVIVWDEGTW 

       130        140        150        160        170        180 
TPEGGLAKAR EGYRAGKLKF RLDGEKLHGG WALVRSGRQE GRQEQWLLIK ERDDDARSAE 

       190        200        210        220        230        240 
AYDVVAQQPG SVHDGATRGH ATNGHARARR RGEKAAGKEP DAEADADTDA DAPRARATKA 

       250        260        270        280        290        300 
KRPPALSRVE GAVRAPLPER IAPQLATLVD APPAHGDWRY ELKFDGYRML ARIAGKGARR 

       310        320        330        340        350        360 
RVTLMTREGR DWTPKLRALR DALAALEVDD AWLDGEAVVL GENGLPDFQL LQNALGSGQS 

       370        380        390        400        410        420 
DAVTLFVFDL PYLNGYDLRD APLTARRAQL EPLFDAADPA RLRFSPDLGS DAAGLIANAC 

       430        440        450        460        470        480 
DTGLEGLIGK RADARYRAGR SPAWIKLKCR RRQEFVIGGY TEPTGSRHGF GALLLGVHEP 

       490        500        510        520        530        540 
APNGKRTRGA SPLRYVGRVG TGFDTRMLDK LAPLLREHER ASSPFDPPPQ GWSRTRVHWV 

       550        560        570        580        590        600 
EPTLVAECEF AEWTGDGIVR QAAFVALRED KPASQIVREV ARHPTTENTM DERTSSSARR 

       610        620        630        640        650        660 
GRAAADTHDG GQDRAQHRAQ ERAPAARGKS APDQVGQVRI THPERVLDRE SGTRKIDLAH 

       670        680        690        700        710        720 
YWERVAPWAL PDLAGRPVSL VRAPQDIGGE LFFQKHAERR EIPFVTQHPG LDPGHGPLLS 

       730        740        750        760        770        780 
IDSVDALIGA AQMGTIELHT WNAHASNIER PDRIVFDLDP DPALPWRTMI EAAQLVRGLL 

       790        800        810        820        830        840 
DELGLVSFCK TSGGKGLHVV VPITRHSGWD EMKDFSRAVA QHIAGALPDR FTATMGPRHR 

       850        860        870        880        890        900 
RGKIFIDYLR NGRGASTIAA YSVRARPGMG VSVPIDWDEV PATTGGAQWT IDTVHERLDA 

       910        920 
LERDPWEAYA DTRQRITAAM RTRLAAR 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Burkholderia multivorans ATCC 17616."
Ohtsubo Y., Yamashita A., Kurokawa K., Takami H., Yuhara S., Nishiyama E., Endo R., Miyazaki R., Ono A., Yano K., Ito M., Sota M., Yuji N., Hattori M., Tsuda M.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17616 EMBL BAG47822.1 and ATCC 17616 / 249.
[2]"Complete sequence of chromosome 3 of Burkholderia multivorans ATCC 17616."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17616 / 249.
[3]"Complete sequence of chromosome3 of Burkholderia multivorans ATCC 17616."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 17616 EMBL ABX19146.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000870 Genomic DNA. Translation: ABX19146.1.
AP009387 Genomic DNA. Translation: BAG47822.1.
RefSeqYP_001585438.1. NC_010087.1.
YP_001941812.1. NC_010801.1.

3D structure databases

SMRA9ATU7. Positions 635-924.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395019.Bmul_5476.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX19146; ABX19146; Bmul_5476.
BAG47822; BAG47822; BMULJ_06021.
GeneID5770842.
6356742.
KEGGbmj:BMULJ_06021.
bmu:Bmul_5476.
PATRIC19161091. VBIBurMul203716_0661.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBCLSK954720.

Enzyme and pathway databases

BioCycBMUL395019:GIYO-6016-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9ATU7_BURM1
AccessionPrimary (citable) accession number: A9ATU7
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: April 16, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)