A9AMD8 (A9AMD8_BURM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-methylcitrate dehydratase EMBL ABX18331.1
EC=4.2.1.79 EMBL ABX18331.1

Gene names

Name:	prpD EMBL BAG45719.1
Ordered Locus Names:	Bmul_4654, BMULJ_03859

Organism

Burkholderia multivorans (strain ATCC 17616 / 249) [Complete proteome] [HAMAP]

Taxonomic identifier

395019 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	484 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABX18331.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	propionate catabolic process, 2-methylcitrate cycle Inferred from electronic annotation. Source: InterPro
Molecular function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: InterPro 2-methylcitrate dehydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9AMD8 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 67DB76F7D17F0529	FASTA	484	52,311
	10 20 30 40 50 60 MSAPVSNARP APDTVLVDIV DYVLNAGAID SALALETARH CLIDTLGCGL EALSYPACTK 70 80 90 100 110 120 LLGPVVPGTI VPNGAKVPGT SFQLDPVKAA FDIGATIRWL DFNDTWLAAE WGHPSDNLGG 130 140 150 160 170 180 ILATADWLSR TAVAAGKAPL AMRDVLIAMI QAHEIQGCLA LENSFNAVGL DHVLLVKVAS 190 200 210 220 230 240 TAVVGRLLGL TRDELINAVS NAFVDGHPLR TYRHAPNTGS RKSWAAGDAT SRAVRLALIA 250 260 270 280 290 300 KTGEMGYPSA LSARTWGFYD VLFGGKPFRF QRPYGTYVME NVLFKIAFPA EFHAQTAVEA 310 320 330 340 350 360 ALQLHDALAA AGRSTDEIAR ITIRTHAAAI RIIDKQGPLA NPADRDHCIQ YMVAVPLLFG 370 380 390 400 410 420 RLTAADYEDA VAADPRIDAL RAKTICVEDP QFTKDYHDPN KRSIANALTI EFANGSTLAE 430 440 450 460 470 480 VAVEYPIGHR RRRADGIPLL VDKFRTNLAR RFPAKQQQAI LDVSLDQAKL EAMPVNEYVD LYMI

References

[1]

"Complete genome sequence of Burkholderia multivorans ATCC 17616." Ohtsubo Y., Yamashita A., Kurokawa K., Takami H., Yuhara S., Nishiyama E., Endo R., Miyazaki R., Ono A., Yano K., Ito M., Sota M., Yuji N., Hattori M., Tsuda M. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17616 EMBL BAG45719.1 and ATCC 17616 / 249 [Tohoku University].

[2]

"Complete sequence of chromosome 2 of Burkholderia multivorans ATCC 17616." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17616 / 249 [DOE JGI].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000869 Genomic DNA. Translation: ABX18331.1. AP009386 Genomic DNA. Translation: BAG45719.1.
RefSeq	YP_001584623.1. NC_010086.1. YP_001948255.1. NC_010805.1.
3D structure databases
ProteinModelPortal	A9AMD8.
SMR	A9AMD8. Positions 13-484.
ModBase	Search...
Protein-protein interaction databases
STRING	A9AMD8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5768916. 6361916.
GenomeReviews	Gene locus BMULJ_03859 in contig AP009386_GR. Gene locus Bmul_4654 in contig CP000869_GR.
KEGG	bmj:BMULJ_03859. bmu:Bmul_4654.
PATRIC	19169722. VBIBurMul203716_4898.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG298383.
OMA	CLMDTLG.
ProtClustDB	PRK09425.
Family and domain databases
InterPro	IPR012705. 2Me_IsoCit_deHydtase_PrpD. IPR005656. MmgE_PrpD. [Graphical view]
KO	K01720.
PANTHER	PTHR16943. MmgE_PrpD. 1 hit.
Pfam	PF03972. MmgE_PrpD. 1 hit. [Graphical view]
SUPFAM	SSF103378. MmgE_PrpD. 1 hit.
TIGRFAMs	TIGR02330. PrpD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9AMD8_BURM1

Accession

Primary (citable) accession number: A9AMD8

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)