Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A9AKW7 (A9AKW7_BURM1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length661 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084

Sequence similarities

Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Ontologies

Keywords
   Molecular functionGlycosidase PIRNR PIRNR001084 EMBL ABX16881.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1421Proton donor By similarity PIRSR PIRSR001084-1
Active site3131Nucleophile By similarity
Binding site1031Substrate By similarity PIRSR PIRSR001084-2
Binding site1411Substrate By similarity PIRSR PIRSR001084-2
Binding site3211Substrate By similarity PIRSR PIRSR001084-2

Sequences

Sequence LengthMass (Da)Tools
A9AKW7 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: D9D654062A2E4658

FASTA66174,176
        10         20         30         40         50         60 
MRVGVCYYPE HWPESMWADD ARRMKALGIA QVRIAEFAWS RIEPSPGEYD WGWLDRAVDV 

        70         80         90        100        110        120 
LAAAGLDIVM CTPTATPPKW LIDRHPEILA IGADGRPRTF GSRRHYDFSS PVYYDASRQI 

       130        140        150        160        170        180 
CTAVAERYGR HPAVRFWQTD NEMGCHQTVV SYSPAALARF REWLKARYGT IDALNRAWGT 

       190        200        210        220        230        240 
VFWSMEYRDF DEIDAPVGTV TEAHPTHRLD YRRFASDEVV RYHRMQVDVI RAHSPGRPVA 

       250        260        270        280        290        300 
HNFMQLFTDF DHYAVARDLD VATWDSYPLG ALEEHWFAPD VKARWLRTGH PDFASFNHDL 

       310        320        330        340        350        360 
YRGMSKLPFW VMEQQPGPVN WAHWNPAPLP GMVRLWSWEA FAHGAGCVSY FRWRQAPFAQ 

       370        380        390        400        410        420 
EQMHAGLHTP DDRLDEGGRE AERVAHEIAV VHGADAHADA AVHARVALVF DYEAKWLLDV 

       430        440        450        460        470        480 
QPQGADFQYA RIAFEYYSAL RALGLDVDVI SAQAPLDGYR LVVVPPLPIV PDDFAARLAA 

       490        500        510        520        530        540 
SGAHAVFGPR TGSKTVDLQI PPTLPPGALA SILPLRVWRV ESLRPNVTER VDGALVDGTP 

       550        560        570        580        590        600 
FAGHARHWRD LVELRDAQRT VVRARFADDH PAWLSHGTLH YWAALFDDAT TAQLFASVAA 

       610        620        630        640        650        660 
EAGLAPTPLA DGVRISRRGG LTYVFNYGDT VHTIDAVPPA AFVVGSADVE PRGVAVYRSP 


V 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Burkholderia multivorans ATCC 17616."
Ohtsubo Y., Yamashita A., Kurokawa K., Takami H., Yuhara S., Nishiyama E., Endo R., Miyazaki R., Ono A., Yano K., Ito M., Sota M., Yuji N., Hattori M., Tsuda M.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17616 EMBL BAG47166.1 and ATCC 17616 / 249.
[2]"Complete sequence of chromosome 2 of Burkholderia multivorans ATCC 17616."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17616 / 249.
[3]"Complete sequence of chromosome2 of Burkholderia multivorans ATCC 17616."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 17616 EMBL ABX16881.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000869 Genomic DNA. Translation: ABX16881.1.
AP009386 Genomic DNA. Translation: BAG47166.1.
RefSeqYP_001583173.1. NC_010086.1.
YP_001949702.1. NC_010805.1.

3D structure databases

SMRA9AKW7. Positions 3-658.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395019.Bmul_3197.

Protein family/group databases

CAZyGH42. Glycoside Hydrolase Family 42.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX16881; ABX16881; Bmul_3197.
BAG47166; BAG47166; BMULJ_05328.
GeneID5768083.
6361892.
KEGGbmj:BMULJ_05328.
bmu:Bmul_3197.
PATRIC19172845. VBIBurMul203716_6453.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1874.
HOGENOMHOG000117811.
KOK12308.
OMATEAHPSH.
OrthoDBEOG6HMX9F.
ProtClustDBCLSK875629.

Enzyme and pathway databases

BioCycBMUL395019:GIYO-5324-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013738. Beta_galactosidase_Trimer.
IPR013780. Glyco_hydro_13_b.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFPIRSF001084. B-galactosidase. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9AKW7_BURM1
AccessionPrimary (citable) accession number: A9AKW7
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: April 16, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)