A9ABM4 (A9ABM4_BURM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
LysR family transcriptional regulator EMBL BAG42200.1

Submitted name:
Transcriptional regulator, LysR family EMBL ABX16691.1

Gene names

Ordered Locus Names:

Bmul_3007 EMBL ABX16691.1, BMULJ_00225 EMBL BAG42200.1

Organism

Burkholderia multivorans (strain ATCC 17616 / 249) [Complete proteome] [HAMAP] EMBL ABX16691.1

Taxonomic identifier

395019 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia multivorans

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lysR-type DNA-binding domain. SAAS SAAS000847

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS000847
Ligand	DNA-binding SAAS SAAS000847
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9ABM4 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: C1461FAE102FB8F7	FASTA	294	32,530
	10 20 30 40 50 60 MRRDLPPFSA LRAFEAAARH ESFSAAGDEL HVTHGAISRQ IAGFEAWLGK PVFHRYGKRV 70 80 90 100 110 120 KLTDEGRRYL DTVRAAFDSI ALATEQLRHT GTARVLRINA LPTFAMKWLL PRLSRFQRDV 130 140 150 160 170 180 PNVELKLSTS NAPLDTLDGF DVAIRRGPGH WPACTSGRFL DESVIPVCSP ALLKRAPIAR 190 200 210 220 230 240 ADDLARHVLL HSDTRPEGWR DWFAAAGVTM KARKRQSFDH FYLALQAAVD GLGVALGPLP 250 260 270 280 290 LIDDELASGR LVMPLAGPRI ATRSYWWIAP RAPADDPLVA QFCAWLEAQS NVGA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Burkholderia multivorans ATCC 17616." Ohtsubo Y., Yamashita A., Kurokawa K., Takami H., Yuhara S., Nishiyama E., Endo R., Miyazaki R., Ono A., Yano K., Ito M., Sota M., Yuji N., Hattori M., Tsuda M. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17616 EMBL BAG42200.1 and ATCC 17616 / 249.
[2]	"Complete sequence of chromosome 1 of Burkholderia multivorans ATCC 17616." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17616 / 249.
[3]	"Complete sequence of chromosome1 of Burkholderia multivorans ATCC 17616." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 17616 EMBL ABX16691.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000868 Genomic DNA. Translation: ABX16691.1. AP009385 Genomic DNA. Translation: BAG42200.1.
RefSeq	YP_001581188.1. NC_010084.1. YP_001944736.1. NC_010804.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	395019.Bmul_3007.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABX16691; ABX16691; Bmul_3007. BAG42200; BAG42200; BMULJ_00225.
GeneID	5765832. 6360009.
KEGG	bmj:BMULJ_00225. bmu:Bmul_3007.
PATRIC	19162141. VBIBurMul203716_1177.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0583.
HOGENOM	HOG000233528.
KO	K03566.
OMA	AAGVTMK.
ProtClustDB	PRK11139.
Enzyme and pathway databases
BioCyc	BMUL395019:GIYO-225-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR005119. LysR_subst-bd. IPR000847. Tscrpt_reg_HTH_LysR. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00126. HTH_1. 1 hit. PF03466. LysR_substrate. 1 hit. [Graphical view]
PROSITE	PS50931. HTH_LYSR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9ABM4_BURM1

Accession

Primary (citable) accession number: A9ABM4

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)