A9A9Q6 (A9A9Q6_METM6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribonuclease P protein component 1 HAMAP MF_00754
Short name=RNase P component 1 HAMAP MF_00754
EC=3.1.26.5 HAMAP MF_00754

Gene names

Name:	rnp1 HAMAP MF_00754
Ordered Locus Names:	MmarC6_1266

Organism

Methanococcus maripaludis (strain C6 / ATCC BAA-1332) [Complete proteome] [HAMAP]

Taxonomic identifier

444158 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanococcaceae › Methanococcus

Protein attributes

Sequence length	98 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends By similarity. HAMAP MF_00754
Catalytic activity	Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. HAMAP MF_00754
Subunit structure	Consists of a catalytic RNA component and at least 4 protein subunits By similarity. HAMAP MF_00754
Sequence similarities	Belongs to the eukaryotic/archaeal RNase P protein component 1 family. HAMAP MF_00754

Ontologies

Keywords
Biological process	tRNA processing HAMAP MF_00754
Molecular function	Hydrolase HAMAP MF_00754
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	mRNA cleavage Inferred from electronic annotation. Source: InterPro rRNA processing Inferred from electronic annotation. Source: InterPro tRNA 5'-leader removal Inferred from electronic annotation. Source: HAMAP
Cellular component	ribonuclease MRP complex Inferred from electronic annotation. Source: InterPro ribonuclease P complex Inferred from electronic annotation. Source: InterPro
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease P activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9A9Q6 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 28ACC9D6046CACB8	FASTA	98	11,302
	10 20 30 40 50 60 MKLSQNILRH ELIGLDLEIV KSTDSGLIST KGRVINETRN TLVLEKENGK EITVVKEIST 70 80 90 FRIQFDFDDV VKVDIDGKLL VGRPEDRLKR KIKQLYSY

References

[1]

"Complete sequence of Methanococcus maripaludis C6." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C6 / ATCC BAA-1332.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000867 Genomic DNA. Translation: ABX02079.1.
RefSeq	YP_001549311.1. NC_009975.1.
3D structure databases
ProteinModelPortal	A9A9Q6.
ModBase	Search...
Protein-protein interaction databases
STRING	A9A9Q6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5739135.
GenomeReviews	Gene locus MmarC6_1266 in contig CP000867_GR.
KEGG	mmx:MmarC6_1266.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG704950.
OMA	ISTKGRV.
ProtClustDB	PRK03879.
Family and domain databases
HAMAP	MF_00754. RNase_P_1. [Tree]
InterPro	IPR002730. RNase_P/MRP_p29. IPR023538. RNase_P_comp-1. IPR023534. Rof/RNase_P-like. [Graphical view]
Gene3D	G3DSA:2.30.30.210. RNase_P_Rpp29. 1 hit.
KO	K03538.
Pfam	PF01868. UPF0086. 1 hit. [Graphical view]
SUPFAM	SSF101744. RNase_P_Rpp29. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9A9Q6_METM6

Accession

Primary (citable) accession number: A9A9Q6

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	November 16, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)