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Protein
Submitted name:

ATP dependent DNA ligase

Gene

MmarC6_0534

Organism
Methanococcus maripaludis (strain C6 / ATCC BAA-1332)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMMAR444158:GHN2-539-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MmarC6_0534Imported
OrganismiMethanococcus maripaludis (strain C6 / ATCC BAA-1332)Imported
Taxonomic identifieri444158 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
ProteomesiUP000000791 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi444158.MmarC6_0534.

Structurei

3D structure databases

ProteinModelPortaliA9A6S3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

A9A6S3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKMYLLKDI SNFEEFILNA SKRLNIDEDT LKNGFKRKLI TKYEYNGKKY
60 70 80 90 100
LCFKKKLKHI ERGTILFLND NLDFIMGYPK IRRAMVLESA VEKYFDGKIA
110 120 130 140 150
VEEKLDGYNI RIVKFYGEII AITRGGKICP FTTKKVKKYL NTKFLDDFPE
160 170 180 190 200
LMLCGEMVGL NNPYVSHYYP EADKDHENLG FYIFDIRNKK TNSALSIYEK
210 220 230 240 250
EKILDKYEIL YLKPIKIIDS SDFEELWNIL DDLNEDYREG VVLKDPEMLK
260 270 280 290 300
NPIKYTTHNT QCGDLSVAFS YVYDLGIDFM FSRLVREGYQ SFEKCENEEE
310 320 330 340 350
IKKRAHDLGE SILMPMVETI NEISREGLAK ECFELYFDSE EDFEEFIKYL
360 370 380 390
KTMHINFAIE NKEHVKKDVF KAKICKIYNS TSDKIKSHLE GNLW
Length:394
Mass (Da):46,578
Last modified:January 15, 2008 - v1
Checksum:i0F1D8F243339CE8C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000867 Genomic DNA. Translation: ABX01351.1.
RefSeqiWP_012193409.1. NC_009975.1.
YP_001548583.1. NC_009975.1.

Genome annotation databases

EnsemblBacteriaiABX01351; ABX01351; MmarC6_0534.
GeneIDi5738611.
KEGGimmx:MmarC6_0534.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000867 Genomic DNA. Translation: ABX01351.1.
RefSeqiWP_012193409.1. NC_009975.1.
YP_001548583.1. NC_009975.1.

3D structure databases

ProteinModelPortaliA9A6S3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi444158.MmarC6_0534.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX01351; ABX01351; MmarC6_0534.
GeneIDi5738611.
KEGGimmx:MmarC6_0534.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciMMAR444158:GHN2-539-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C6 / ATCC BAA-1332Imported.

Entry informationi

Entry nameiA9A6S3_METM6
AccessioniPrimary (citable) accession number: A9A6S3
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: May 27, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.