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A9A6S3 (A9A6S3_METM6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MmarC6_0534 EMBL ABX01351.1
OrganismMethanococcus maripaludis (strain C6 / ATCC BAA-1332) [Complete proteome] [HAMAP] EMBL ABX01351.1
Taxonomic identifier444158 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABX01351.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A9A6S3 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 0F1D8F243339CE8C

FASTA39446,578
        10         20         30         40         50         60 
MDKMYLLKDI SNFEEFILNA SKRLNIDEDT LKNGFKRKLI TKYEYNGKKY LCFKKKLKHI 

        70         80         90        100        110        120 
ERGTILFLND NLDFIMGYPK IRRAMVLESA VEKYFDGKIA VEEKLDGYNI RIVKFYGEII 

       130        140        150        160        170        180 
AITRGGKICP FTTKKVKKYL NTKFLDDFPE LMLCGEMVGL NNPYVSHYYP EADKDHENLG 

       190        200        210        220        230        240 
FYIFDIRNKK TNSALSIYEK EKILDKYEIL YLKPIKIIDS SDFEELWNIL DDLNEDYREG 

       250        260        270        280        290        300 
VVLKDPEMLK NPIKYTTHNT QCGDLSVAFS YVYDLGIDFM FSRLVREGYQ SFEKCENEEE 

       310        320        330        340        350        360 
IKKRAHDLGE SILMPMVETI NEISREGLAK ECFELYFDSE EDFEEFIKYL KTMHINFAIE 

       370        380        390 
NKEHVKKDVF KAKICKIYNS TSDKIKSHLE GNLW 

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References

[1]"Complete sequence of Methanococcus maripaludis C6."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Whitman W.B., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C6 / ATCC BAA-1332.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000867 Genomic DNA. Translation: ABX01351.1.
RefSeqYP_001548583.1. NC_009975.1.

3D structure databases

ProteinModelPortalA9A6S3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING444158.MmarC6_0534.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX01351; ABX01351; MmarC6_0534.
GeneID5738611.
KEGGmmx:MmarC6_0534.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1423.
HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.
ProtClustDBCLSK862643.

Enzyme and pathway databases

BioCycMMAR444158:GHN2-539-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9A6S3_METM6
AccessionPrimary (citable) accession number: A9A6S3
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: April 16, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)