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Protein

Ribonuclease P protein component 3

Gene

rnp3

Organism
Methanococcus maripaludis (strain C6 / ATCC BAA-1332)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 3UniRule annotation (EC:3.1.26.5UniRule annotation)
Short name:
RNase P component 3UniRule annotation
Alternative name(s):
Rpp30UniRule annotation
Gene namesi
Name:rnp3UniRule annotation
Ordered Locus Names:MmarC6_0481
OrganismiMethanococcus maripaludis (strain C6 / ATCC BAA-1332)
Taxonomic identifieri444158 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanococcaceaeMethanococcus
Proteomesi
  • UP000000791 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001945911 – 232Ribonuclease P protein component 3Add BLAST232

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits.UniRule annotation

Protein-protein interaction databases

STRINGi444158.MmarC6_0481.

Structurei

3D structure databases

ProteinModelPortaliA9A6K3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic/archaeal RNase P protein component 3 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG00307. Archaea.
COG1603. LUCA.
HOGENOMiHOG000296348.
KOiK03539.
OMAiINHIFDE.

Family and domain databases

HAMAPiMF_00756. RNase_P_3. 1 hit.
InterProiIPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view]
PfamiPF01876. RNase_P_p30. 1 hit.
[Graphical view]
SUPFAMiSSF89550. SSF89550. 1 hit.

Sequencei

Sequence statusi: Complete.

A9A6K3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEGIIDINH IFDEEGIKTL KRFGWDGSVA VQNHNEYSEE IINSTVEYGE
60 70 80 90 100
KHDFKVFSGV KISTKNQNEM EKAIKKYRNK VDILLVEGGD IKINRRVLEM
110 120 130 140 150
NDVDILSTPE LNRMDNGLDH ILARLGSTNR VAIELNFGNL LKSRNYDRSK
160 170 180 190 200
ILWAFQRNLK LAKKYDTPVV ISSGASDIYG IKAPGDLRGF LNTITDPLYS
210 220 230
KKIMETTSKI IDYRLYLKKD TVLTLGIEIV EE
Length:232
Mass (Da):26,514
Last modified:January 15, 2008 - v1
Checksum:i7FA6AE065705D13E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000867 Genomic DNA. Translation: ABX01299.1.
RefSeqiWP_012193267.1. NC_009975.1.

Genome annotation databases

EnsemblBacteriaiABX01299; ABX01299; MmarC6_0481.
GeneIDi5738475.
KEGGimmx:MmarC6_0481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000867 Genomic DNA. Translation: ABX01299.1.
RefSeqiWP_012193267.1. NC_009975.1.

3D structure databases

ProteinModelPortaliA9A6K3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi444158.MmarC6_0481.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX01299; ABX01299; MmarC6_0481.
GeneIDi5738475.
KEGGimmx:MmarC6_0481.

Phylogenomic databases

eggNOGiarCOG00307. Archaea.
COG1603. LUCA.
HOGENOMiHOG000296348.
KOiK03539.
OMAiINHIFDE.

Family and domain databases

HAMAPiMF_00756. RNase_P_3. 1 hit.
InterProiIPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view]
PfamiPF01876. RNase_P_p30. 1 hit.
[Graphical view]
SUPFAMiSSF89550. SSF89550. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRNP3_METM6
AccessioniPrimary (citable) accession number: A9A6K3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: January 15, 2008
Last modified: November 2, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.